ggKbase home page
Advanced Search
Search Help

FFV18_Bp1_scaffold_167936_2

Organism: FFV18_Bp1_Acidobacteria_54_23

near complete RP 42 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38 MC: 1
Location: comp(2087..5596)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 1156.0
  • Bit_score: 1011
  • Evalue 5.00e-292
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D1FBE similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 1179.0
  • Bit_score: 1020
  • Evalue 1.30e-294

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3510
ATGGATGCGGTCTTGATAAGAAAATTATTTTCCCGGTTTACGGAACATCCTGAATTCCAAAGGTCCCTTGCTTTGATAAAAGCCGGCCACGGCGTAGTCGATGTCTCCGGGCTATCGGGGGGCAGCAAAGGGCTCTTCGTGGCCCTGTTAAATCGAGTTCTTGGCAGACCGATCGTGTTTCTTACTTCAAAGAACCAAGCGGTCGACGAACTTCTGAATGATACGCGCTTCTTCCTCTCGTGGCTGAAAGTTGATCCCGAAACGGTGTTGGCTTTTCCGGGCTTTGAAGTAGATTGTTATCGATTGTCACCGCACCCAGAGGTCTCTGAGCAGCGGGCCGGTACTTTATGGCGTCTCTTGACCACCCAGGTCAATATACTCGTAGCTCCGCTCGAATCCATCCTATTTCGCATAGTCGCTCCCGATGATTTTGCACAAGTATGTAAGACCTTGAAGGTGGGTGAGGATTACCCACCGGAAACGCTGGTCCGTACTTTACGGGCGGGGGGCTTTGTATATGAAGATCCTGTCACAGTTATTGGAGAGTTCTCTCAGCGCGGCAGCATCGTCGATTTCTTCCCGCACAATGACGAGTGGCCATTACGTGTGGAATTCTTTGGCGATACCATCGAATCCATCCGGCAATATAATCCGGAAACCCAGAGATCTATTGAAGCCGTTCCACAAGTGGAGCTGGTTCCCATGCGTGAATGGTGCCCAACCACTCAGCAGTTGCAGTGGTGGGCGGAAGTAGCCGGCGAAACCTGGCCGCTAGATGAAGATGCCAAGCACCTACGCGATCGTATAAACGCGGCTACGTCCGGACAGACGTTCCCGGCCTTTGAATTTCTGCTTCCGCTAACTGAGCCGGTGCGCGGAACCTTGTTCGACTATACGCCCGATTTTCTATTCGTTATTGATGAGCCGGAATCACTGCAGGCCACGGCAAAATCATTCTTAAAGAAGCTTCAGGCGCGCTATTCTGAACTAGCCGCCTTACAACTTCCCGCCATATCTCCGGACCATTTGACGCTGACCCTGGAAGAAATTGAGTCCCACTTACAACACTGTACTCGCATCAATCTGCGCGAGCTGGGCACCCTCTCTCCTGACCCTTCGCCGGACATTTTATTACGAACACAGCCCGTACGGATGTACCACGGTATGCTGAAGGATGCCATTGCAGATGTTCGTAAAACCCATGAAAACGGAGAGACCGCCCTTTACATTCTGTCCAGCTTGGGCCGCGCCGAACGGTTGCTGGATATCTTTACCGAGTATGATTTGCCTATGGCGTTGGTCCCCAAGCCGTCTGCGGATGATGCCTGCCGCGAGACGGCGCAACCTTTCCCTTGTCCGGCCGGAGCGATCATGGCCACGACCGGCAATGTTTCCCGTGGGTTTGCTTTTCCGGAAATGGGCTTGACCGTGTATACCAGCGTTGATCTATTTGATGAAGCCGAACTCAATTTGGCCCCGCGTCGGCGGAAAATCGCGCGCTCAACCTTTTTCTCCGATTTTCGCGATCTGCGAGAAGGCGACTATGTAGTACATTTGGATCACGGAATCGGGCAATTCCAGGGACTGCGGCGGATAGGTCTTGGCGATGAAGTTAAGGAATTCATGTTGATCACATACCGAGATGATGACAAGGTATACGTCCCGGTTGAAAACCTTGACCTGATACAAAAATATGCCCAAGCCGGTGAGGCCTCGCCGACATTGGACAAGTTAGGCGGCGCCACTTGGGTAAAAACCAAGGCTAAGATCAAAAAATCCATGCGAGACATGGCGGACGAACTGCTTCGACTTTATGCGGAACGAGGCCTGGCGCAGGGGCACGCCTTCAGCAACGACGGCCATTGGCAGCGCGAGTTCGAAGATGCGTTCGAATTCGAGGAAACCCCGGATCAGGCCGGCGCCATTCTCGAGATGAAGGAAGACATGGAAGCTACGCGGCCCATGGACCGCCTGATCTGCGGTGATGTCGGTTACGGTAAGACCGAAGTGGCCATGCGGGGAGCCTTCAAAGCTACGATAGAGGGTAAGCAGGCCGCGGTGCTTACTCCGACCACCGTGCTGGCTTTTCAGCATTACACAACCTTCAAATCCCGCTTCGCGGCCTTTCCCATCCAGATTGAAATGCTCAGCCGGTTTAAGAGCAAAAAAGAACAGGAGAAGATCCTGGAAGATTTGGAGAGTGGGAAGATTGATATCATCATCGGAACGCATCGCCTGCTGTCTTCCGATGTTAAATTTCATGATCTCGGCTTGCTGATTGTGGATGAAGAACAACGTTTCGGCGTCACCCACAAAGAGCGTCTGAAAAAGTTTAAAACCCAAATAGACATATTGACGCTATCGGCCACCCCGATTCCCCGCACACTGCACATGGCCATGACCGGCATACGCGACATGTCGATTATTGAAACCCCGCCTAAAGATCGCCTGGCCATACAAACCATGGTTGTGCGGTTTGATCCCAGCGTCGTGCGCTCGGCCATTAATCTTGAGCTGGCGCGCAACGGCCAAGTCTACTTTGTCCACAATCGAATCGAGACCATATACGCGCGGGCTTCGGCGATTCAGTCGCTGTGTGCGGAGGCGCGCGTCGTGGTGGCGCACGGACAAATGCGCGAAGGCGAGCTGGAAAAGATCATGATTAAATTTGTCAACCACGAGTTCGATGTTTTGGTTTCGACGACAATCATCGAGAACGGACTCGACGTGGCTTTGGCCAATACCATCATTATTGAGCGAGCCGACTCTTACGGATTGTCCGAACTCTACCAATTGCGCGGACGTGTGGGACGCTCCAATCGTCGCGCTTACGCTTATTTGTTGGCGCCACCGGAGGACTCGCTGACCGAGTTGGCGCGCAAGCGGTTGGCGGCTATTCGCGAATTTAGCGACTTAGGCTCGGGCTTCCGGCTGGCGGCTATGGATCTGGAGATACGGGGCGCCGGTAATTTGCTGGGCGGTGAGCAGCATGGCCATATCAATGCCGTGGGGTTTGAATTATATAATCAGCTTCTCGAGCAAGCAATTCAGGAACGGAAAGGCGAGCGGCCGGCGGTCGAGGTGAAGACCGCGATCAACCTCAATCTGGATATACGTATTCCTGAGGAATATATCGGCGATGCCGGTCAGCGCCTGCGCGCCTACAAACGTATCGCCTCCGTGCAGTCCGCTGAGGAGCTGGTACAGGTGAAGGCTGAGATCGCCGATCGGTTCGGCAAGTATCCCGAAGCCTTGGAAAATCTATTTGAATATGCCGGCCTGCGGCTTCAAAGCTATGCCTTGCGTGTGCATTCCATTGAGCGGCAAGGCGAGAGAGTTTTAATAAAGTTTATGCCGGAATCGACGGTCTCCGCGGAAAACGTCGTTCGGGTGATTGCTCGACTTAAGGGTGCGGCCCTTTCCCCGAACGGTGTTCTAACCATAAGACCCGAGGCCGGACGACCGCCTTTGCCGCAACTCCGTAGAATCTTGGAACTGTTAAGCGCTTGA
PROTEIN sequence
Length: 1170
MDAVLIRKLFSRFTEHPEFQRSLALIKAGHGVVDVSGLSGGSKGLFVALLNRVLGRPIVFLTSKNQAVDELLNDTRFFLSWLKVDPETVLAFPGFEVDCYRLSPHPEVSEQRAGTLWRLLTTQVNILVAPLESILFRIVAPDDFAQVCKTLKVGEDYPPETLVRTLRAGGFVYEDPVTVIGEFSQRGSIVDFFPHNDEWPLRVEFFGDTIESIRQYNPETQRSIEAVPQVELVPMREWCPTTQQLQWWAEVAGETWPLDEDAKHLRDRINAATSGQTFPAFEFLLPLTEPVRGTLFDYTPDFLFVIDEPESLQATAKSFLKKLQARYSELAALQLPAISPDHLTLTLEEIESHLQHCTRINLRELGTLSPDPSPDILLRTQPVRMYHGMLKDAIADVRKTHENGETALYILSSLGRAERLLDIFTEYDLPMALVPKPSADDACRETAQPFPCPAGAIMATTGNVSRGFAFPEMGLTVYTSVDLFDEAELNLAPRRRKIARSTFFSDFRDLREGDYVVHLDHGIGQFQGLRRIGLGDEVKEFMLITYRDDDKVYVPVENLDLIQKYAQAGEASPTLDKLGGATWVKTKAKIKKSMRDMADELLRLYAERGLAQGHAFSNDGHWQREFEDAFEFEETPDQAGAILEMKEDMEATRPMDRLICGDVGYGKTEVAMRGAFKATIEGKQAAVLTPTTVLAFQHYTTFKSRFAAFPIQIEMLSRFKSKKEQEKILEDLESGKIDIIIGTHRLLSSDVKFHDLGLLIVDEEQRFGVTHKERLKKFKTQIDILTLSATPIPRTLHMAMTGIRDMSIIETPPKDRLAIQTMVVRFDPSVVRSAINLELARNGQVYFVHNRIETIYARASAIQSLCAEARVVVAHGQMREGELEKIMIKFVNHEFDVLVSTTIIENGLDVALANTIIIERADSYGLSELYQLRGRVGRSNRRAYAYLLAPPEDSLTELARKRLAAIREFSDLGSGFRLAAMDLEIRGAGNLLGGEQHGHINAVGFELYNQLLEQAIQERKGERPAVEVKTAINLNLDIRIPEEYIGDAGQRLRAYKRIASVQSAEELVQVKAEIADRFGKYPEALENLFEYAGLRLQSYALRVHSIERQGERVLIKFMPESTVSAENVVRVIARLKGAALSPNGVLTIRPEAGRPPLPQLRRILELLSA*