ggKbase home page

AR_MS4_05142019_scaffold_6892

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_6892_1
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

1..774
DNA (774bp) protein (258aa)
AMP-dependent synthetase and ligase id=2238933 bin=GWB2_Chloroflexi_49_20 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
AMP-dependent synthetase/ligase
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
AR_MS4_05142019_scaffold_6892_2
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

832..1635
DNA (804bp) protein (268aa)
putative alpha/beta-hydrolase fold family hydrolase (EC:3.1.1.24)
Putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) id=2238932 bin=GWB2_Chloroflexi_49_20 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
AR_MS4_05142019_scaffold_6892_3
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

1708..3057
DNA (1350bp) protein (450aa)
Extracellular ligand-binding receptor id=2238931 bin=GWB2_Chloroflexi_49_20 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
extracellular ligand-binding receptor
Tax=GWC2_Chloroflexi_49_37_curated
AR_MS4_05142019_scaffold_6892_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3132..3848
DNA (717bp) protein (239aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0P6_ROSS1
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABQ92449.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
AR_MS4_05142019_scaffold_6892_5
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

3832..4581
DNA (750bp) protein (250aa)
ABC transporter related id=3330537 bin=GWC2_Chloroflexi_49_37 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter-like protein
Tax=GWC2_Chloroflexi_49_37_curated
AR_MS4_05142019_scaffold_6892_6
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

4595..6139
DNA (1545bp) protein (515aa)
Inner-membrane translocator n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0P8_ROSS1
inner-membrane translocator
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
AR_MS4_05142019_scaffold_6892_7
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6151..7197
DNA (1047bp) protein (349aa)
Inner-membrane translocator n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0P9_ROSS1
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABQ92452.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
AR_MS4_05142019_scaffold_6892_8
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7343..7513)
DNA (171bp) protein (57aa)
Putative uncharacterized protein id=1713207 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_9
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7569..7760)
DNA (192bp) protein (64aa)
Thiolase family protein id=1847844 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
thiolase family protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_10
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7784..8626)
DNA (843bp) protein (281aa)
Thiolase family protein id=1713208 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
thiolase family protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_11
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8739..9803)
DNA (1065bp) protein (355aa)
Hydroxymethylglutaryl-coenzyme A synthase family protein id=4338671 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hydroxymethylglutaryl-coenzyme A synthase family protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_12
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(9831..11111)
DNA (1281bp) protein (427aa)
mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-coenzyme A reductase id=1713210 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_13
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11224..12909
DNA (1686bp) protein (562aa)
Putative two-component sensor histidine kinase id=1713211 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative two-component sensor histidine kinase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_14
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

13356..14708
DNA (1353bp) protein (451aa)
Chromosomal replication initiator protein DnaA id=4338677 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
dnaA; chromosomal replication initiator protein DnaA
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_15
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14764..15618)
DNA (855bp) protein (285aa)
Putative uncharacterized protein id=1860690 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_16
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

15712..17436
DNA (1725bp) protein (575aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DXF4_9FIRM
cysteine ABC transporter permease/ATP-binding protein CydD
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_17
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17471..19189
DNA (1719bp) protein (573aa)
cysteine ABC transporter permease/ATP-binding protein CydC (EC:3.6.3.44)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC id=1699527 bin=GWB2_Chloroflexi_49_20 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_18
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

19228..19686
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IL08_9BACT
hypothetical protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_19
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

19771..22269
DNA (2499bp) protein (833aa)
ATPase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SQ54_9CHLR
ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_20
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22393..22932
DNA (540bp) protein (180aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
msrA; peptide methionine sulfoxide reductase MsrA
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_21
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22938..23588
DNA (651bp) protein (217aa)
tRNA-dihydrouridine synthase id=2181744 bin=GWB2_Chloroflexi_54_36 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
tRNA-dihydrouridine synthase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_22
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(23779..24489)
DNA (711bp) protein (237aa)
Branched-chain amino acid aminotransferase id=4827003 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
branched-chain amino acid aminotransferase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_23
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24612..25214)
DNA (603bp) protein (201aa)
Hemolysin A n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C326_SPHTD id=1244540 bin=RBG9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative hemolysin
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_24
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

25251..26111
DNA (861bp) protein (287aa)
Putative prenyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5A5_ANATU
putative prenyltransferase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_25
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

26128..27114
DNA (987bp) protein (329aa)
Mevalonate kinase id=1799965 bin=GWD2_Chloroflexi_49_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
mvk; mevalonate kinase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_26
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

27129..27743
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=2296857 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_27
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

27736..28446
DNA (711bp) protein (237aa)
DNA repair protein RadC n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4R5_ANATU
radC; DNA repair protein RadC
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_28
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(28443..28820)
DNA (378bp) protein (126aa)
Undecaprenyl-phosphate galactose phosphotransferase id=2220740 bin=GWB2_Chloroflexi_49_20 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative glycosyltransferase
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_29
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28913..29077
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379907F
Tax=CG_Anaero_03
AR_MS4_05142019_scaffold_6892_30
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

29208..29888
DNA (681bp) protein (227aa)
OmpR family two-component response regulator id=2466130 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
OmpR family two-component response regulator
Tax=CG_Anaero_03
Displaying items 1-30 of 31 in total

View Taxonomy