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AR_MS4_05142019_scaffold_1128_20

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 26324..27469

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 364.0
  • Bit_score: 621
  • Evalue 4.80e-175
Transcription termination factor Rho n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP80_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 364.0
  • Bit_score: 621
  • Evalue 3.40e-175
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 369.0
  • Bit_score: 394
  • Evalue 2.50e-107

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1146
TTGGCGCACCATAATAACAGGCGACACACTAATATTGGCCCGCTCCCGGAGAGCGGTTCCGGTTTCCTCGAAATCTCCGAGAAGGGCTTCGGCTTTTTGCGGACCCATGAGGACCACTTCCGCCCCAAACCGGCGGACATCTTCGTAACCCCAGACACCATCAAACGCGCGTTCCTCCGCGAGGGGTGCGCTGTTCAAGGCACGCTGCAGGCCCCGCACCGCGGCAGCAGCGCGCAACTGAAGGAGGTCACGCACGTCAACGGCATGCCGTACGCCACGTACGTCACCTCGATGCGTTTCGAGAACCTCACCACCATCGACCCCTGCGACAAGTTCCGCCTCGAGACCGCCCCCGACCTGCTCGAGACCCGCATCATTGACCTCGTCACCCCCATCGGCAAGGGCACCCGCGGCTTGATCGTCGCCCCGCCCCGCACGGGCAAGACCACGATCCTCAAACAGATCGCCAACGCGGTCACCGAGAACCACCCTGAAGTCTTCGTCATGGTCCTGCTGATTGACGAGCGCCCGGAGGAAGTCACCGACTTCCAGCGTTCCGTCAAAGCGGAGGTCGTAGCCTCCTCCAACGACCAGGACCTCGAGACTCACGTGCGGCTTTCCCGCTTCATGATCGAGCGTTGCCGTCGCATGGTGGAAACCGGCAAGGACGTCTTCGTGCTGCTTGACTCCATCACGCGGGTCGCCCGGGCCTACAACAGCGTCCACGGCGGCAGCGGCCGCACCATGACCGGCGGGGTGGACGCCCGGGCCTTGGAGATTCCCCGCAAGATGTTTGCGGCCGCCCGCAAGCTCGAGGAGGCCGGGTCGCTCACGATTCTGGCGACCGCGCTGATCGACACTGGATCGCGCATGGACGAACTCATCTTCCAGGAGTTCAAGGGCACCGGCAACATGGAGTTGGTTCTGGACCGCAAGCTCTCGGATCGCCGGCTTTTCCCCGCCATCGACATCCCCAAGAGCGGCACCCGCAAGGAAGAGAAGCTCTTTCCGAAGCACCAGATCGAGGCGGTGCGCAAATTGCGGCGGATGATGGTGGATCTTAATCCGGTGGAAGCGATGGAGACACTCCAAGCCGCCCTCAAGAAGCACAAGACCAACGAGGAACTGCTAGCCAAGCTGCTCTAG
PROTEIN sequence
Length: 382
LAHHNNRRHTNIGPLPESGSGFLEISEKGFGFLRTHEDHFRPKPADIFVTPDTIKRAFLREGCAVQGTLQAPHRGSSAQLKEVTHVNGMPYATYVTSMRFENLTTIDPCDKFRLETAPDLLETRIIDLVTPIGKGTRGLIVAPPRTGKTTILKQIANAVTENHPEVFVMVLLIDERPEEVTDFQRSVKAEVVASSNDQDLETHVRLSRFMIERCRRMVETGKDVFVLLDSITRVARAYNSVHGGSGRTMTGGVDARALEIPRKMFAAARKLEEAGSLTILATALIDTGSRMDELIFQEFKGTGNMELVLDRKLSDRRLFPAIDIPKSGTRKEEKLFPKHQIEAVRKLRRMMVDLNPVEAMETLQAALKKHKTNEELLAKLL*