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AR_MS4_05142019_scaffold_5780_6

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 7456..8850

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 467.0
  • Bit_score: 625
  • Evalue 3.10e-176
RNA-splicing ligase RtcB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4H9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 467.0
  • Bit_score: 625
  • Evalue 2.20e-176
rtcB; RNA 2',3'-cyclic phosphate--5'-hydroxyl ligase similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 469.0
  • Bit_score: 539
  • Evalue 5.80e-151

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAACACGAAAGACCTGATCCGCCTGGGAGTGCCGCCGGGTGAACCGACGCGGCGCGGGATGGAATTCATCGCCCGCTATGTCCTGAAAGGCCTCGACAAGGCCAAGCTCGCCGAGGACCTCGAGGCGGTGGTCCGCACCCCGGCCTCCTTCACCGATGACGACCTGCGCGGCGAATTCGCCAAGGCGCTGGTCCGTTGCGAGCGCACGATCCGCGACGCGCCCGCTGCCTGGCGGCAGTGGGGCGAGGGCCTGGAGCCCGAGGCGGTGAATCAGATTGCGCGCGCGTGTCAGTTGCCGATCGCCGTCGCGGGCGCCCTGATGCCCGACGCGCACCTCGGCTACGGCCTGCCCATCGGCGGGGTGCTGGCCACCGACAACGCCGTGATCCCCTACGCCGTGGGCGTGGACATTGCGTGCCGCATGAAGATGACGGTGCTCGATCTGCCGGTGCGCGAATTGGACCGGCAGCGGGAGCAACTGGTGAAGGCCATCGAGGCGGAGACCCGCTTTGGCGTGGGGGCCACGTTCAAGCAGCGTCGGGACCACGAGGTCCTGGAGGCCAATTGGAACATCAGCCCGCCGACCAAGCAGAACCGCGACCGCGCCTGGGCGCAGTTGGGCACCAGCGGCAGTGGCAACCATTTCGTCGAGTTCGGGACGTTCACGAACGAGCAAGCGATCCACGGCCTGCCGGCGGGCGAATACGTGGCGCTGCTCAGCCACAGCGGCAGCCGGGGAACCGGTTCCGCCGTGTGCGAGCACTACAGCAAGCTGGCGATGGCCCAGCACGCGAACCTGGCCAAGGAGCACAAGCACCTGGCCTGGCTGATGCTCGATTCCGCCGAGGGCCAGGAGTACTGGGCGGCGATGGAGTTGATGGGCCGTTACGCCGCCGCCAACCACGAACTCATCCACCGCTGGATCGCCCGTCACCTGCGCCTGAACGTGCTCCTCGATGTCGAGAACCATCACAACTTTGCGTGGAAGGAGCGGCATGTCATCGACGGTATCGAACGCGAGGTGGTGGTCCACCGCAAAGGCGCCACCCCGGCTGGCCAAGGTGTGCTGGGAATCATCCCCGGCTCGATGGCGACGCCCGGCTTTCTGGTGCGCGGCAAGGGCGAGCCAGCATCGCTGAAGTCGGCGTCGCACGGCGCGGGCCGGGTGATGAGCCGCACCAAGGCGGTCGAGACCTTCGAGTGGGAGAAGGTGAACCGCGTCCTTAAGGAGCGCGGGGTGAGGCTCATTTCGGCCGGCCTGGATGAGGTTCCCGGTGTGTACAAGGACATCCACCAGGTCATGGCGGCGCAGGCGGACCTTGTGGAGGTGCTCGGCCGCTTTGACCCCAAGCTGGTCAAAATGGCGCCGCACGGCGAACGGCCGGAGGATTGA
PROTEIN sequence
Length: 465
MNTKDLIRLGVPPGEPTRRGMEFIARYVLKGLDKAKLAEDLEAVVRTPASFTDDDLRGEFAKALVRCERTIRDAPAAWRQWGEGLEPEAVNQIARACQLPIAVAGALMPDAHLGYGLPIGGVLATDNAVIPYAVGVDIACRMKMTVLDLPVRELDRQREQLVKAIEAETRFGVGATFKQRRDHEVLEANWNISPPTKQNRDRAWAQLGTSGSGNHFVEFGTFTNEQAIHGLPAGEYVALLSHSGSRGTGSAVCEHYSKLAMAQHANLAKEHKHLAWLMLDSAEGQEYWAAMELMGRYAAANHELIHRWIARHLRLNVLLDVENHHNFAWKERHVIDGIEREVVVHRKGATPAGQGVLGIIPGSMATPGFLVRGKGEPASLKSASHGAGRVMSRTKAVETFEWEKVNRVLKERGVRLISAGLDEVPGVYKDIHQVMAAQADLVEVLGRFDPKLVKMAPHGERPED*