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AR_MS4_05142019_scaffold_29924_2

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 425..1813

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 428.0
  • Bit_score: 516
  • Evalue 2.60e-143
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037C089F similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 461.0
  • Bit_score: 765
  • Evalue 2.30e-218
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 424.0
  • Bit_score: 515
  • Evalue 9.00e-144

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Taxonomy

Methylacidiphilum kamchatkense → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1389
ATGCATCATTTTCGCTATCAAGGGGACGCGCTTTTTGTCGAGGGGGTCGACGTCGCCGGCTTGGCCGAAAGATATGGGACCCCGCTCTATGTCTACTCGGCCGGCACCATCGTGGATCACTACGAGCGACTGCTTTCCTCCCTGCGGAAGGTGGACCCGCTTGTCTGCTATGCGGTAAAAGCCAATTCTAACCTGGCTCTGCTTGGTCTGCTCGCCTCCCGCGGCTGTGGCTTCGATCTGGTGAGCGGAGGGGAGCTCTATCGAGTCCTTCGAGCCGGCGGCGATCCCGCTCGCTCCACGTTTGCCGGCGTCGGGAAGACTGCCCAGGAGATTGAGGAAGCCCTGGAAGCGGGGATCTACAGTTTCGTCGTCGAGAGCCAAGAGGAGCTGGAGGTCATTGATCGCGTGGCCGCTCGCTTGGGTAAGCGGGCCCCCGTAGCTCTTCGCGTAAATCCCGATGTCGGTGCCAGAACCCATGCCAAGATAAAGACGGGCGTGGCGGAGAGCAAATTTGGCATCTCGGCGGAGGAGATCGAAGAGCTTTATCGGCAGCTTCCCCGCTTTTCTCATCTATCGCTGCGGGGCATTCAAATCCATATCGGCTCTCAGATTCGTGACGTAGAACCTTTTGAAGAGGCGATCCGTCGGGTGATTCCCCTGGTGGAGATCGCGCGCGACCGATTTGGCGCGGAGTTCTTTGACATTGGCGGGGGGTTGGGGATCGCCTATGAGGAGGCCTTGCAGAGCGGCGACCCCGGCTGGTGGGAGAGCAAGACGGAGTGGGCGACGCCGGGGCGTTACGCGGAGCGCTTGCTGCCCCTGCTCGGACCTCTTCATCTCCGCATCGTGGTGGAGCCGGGGCGGCTCCTCGTCGGAAACGCCGGCATTCTTCTCACGAAAGTCCTCTACCGAAAGGATCGGCCGCAGAAAAAATTCGTGATCGTCGATGCGGGGATGAACGATCTGATCCGGCCAGCGCTTTATGGGTCGTTTCACCAGATCGTGCCTGCTGCCCGTCGAGGAACGGATCTGGTCGAAGCGGACGTCGTGGGCCCGGTCTGCGAGTCTAGCGACTGCTTCGCCCGTTCACGGCGGATGCCTTCGGTAGAACCGGGGGAGCTGCTGGCGATCTTCAGTGCCGGGGCGTACGGCTTCTCCATGGCCTCCCAATACAATTCACGACCGAGACCGGCCGAGGTCCTAGTGGAGCGAGCGAATCATCGGCTCATCCGCCGGCGGGAGAGCTATGAGGATCTTGTTCGTGGAGAATTGACTGGTGAAAGAGATCTTGCTCCCGAACTCGCAAGAGGGCCGGAAGGAGAGAAGAGCCGGGCGGAAGAGAGCGAACACCCGAAACAAGACCAAGCGGGTCGGAAGGAGAAGCGATGA
PROTEIN sequence
Length: 463
MHHFRYQGDALFVEGVDVAGLAERYGTPLYVYSAGTIVDHYERLLSSLRKVDPLVCYAVKANSNLALLGLLASRGCGFDLVSGGELYRVLRAGGDPARSTFAGVGKTAQEIEEALEAGIYSFVVESQEELEVIDRVAARLGKRAPVALRVNPDVGARTHAKIKTGVAESKFGISAEEIEELYRQLPRFSHLSLRGIQIHIGSQIRDVEPFEEAIRRVIPLVEIARDRFGAEFFDIGGGLGIAYEEALQSGDPGWWESKTEWATPGRYAERLLPLLGPLHLRIVVEPGRLLVGNAGILLTKVLYRKDRPQKKFVIVDAGMNDLIRPALYGSFHQIVPAARRGTDLVEADVVGPVCESSDCFARSRRMPSVEPGELLAIFSAGAYGFSMASQYNSRPRPAEVLVERANHRLIRRRESYEDLVRGELTGERDLAPELARGPEGEKSRAEESEHPKQDQAGRKEKR*