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AR_MS4_05142019_scaffold_50820_1

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..359)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 119.0
  • Bit_score: 190
  • Evalue 8.50e-46
tRNA pseudouridine synthase B n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JYE7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 119.0
  • Bit_score: 190
  • Evalue 6.00e-46
truB; pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 119.0
  • Bit_score: 185
  • Evalue 7.20e-45

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Taxonomy

Methylacidiphilum fumariolicum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 357
ATGGAAATTGACGGAGTTCTTCTTTTAGACAAGCCCAAGGGGTGCACATCCCACGATATGGTCGACGTCCTGCGCCGCCGCTTCGGGCTACGGAAAGTCGGCCACTGCGGAACGCTCGACCCTCTGGCGACCGGGCTGCTCGTCCTCGTCCTCGGCAAGGCCACGCGCATTCAGGATCTCCTCATGGCGGAGGACAAACGCTACCGCGGCGTGATGCGTCTGGGCCAGATCACCGATACACAAGACGCCGACGGTCGAATCGTGGAGGAACGCCCGGTCTCGCCCTTCTCTCTTGAGCAGTTGGAGGCGGTCTTCTCCAGATTCTCCGGAGAGTTCCTGCAAGTGCCTCCCATGGTC
PROTEIN sequence
Length: 119
MEIDGVLLLDKPKGCTSHDMVDVLRRRFGLRKVGHCGTLDPLATGLLVLVLGKATRIQDLLMAEDKRYRGVMRLGQITDTQDADGRIVEERPVSPFSLEQLEAVFSRFSGEFLQVPPMV