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BD02T64_scaffold_250

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_250_31
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40766..41317
-----------------
DNA (552bp)
protein (184aa)
Chemotaxis protein CheY n=1 Tax=Halomonas sp. PBN3 RepID=U7NKP5_9GAMM
Chemotaxis protein CheY {ECO:0000313|EMBL:ERS83898.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.
two component transcriptional regulator, Fis family
BD02T64_scaffold_250_32

Not on your lists

41481..42686
-----------------
DNA (1206bp)
protein (402aa)
Alpha-methylacyl-CoA racemase n=1 Tax=uncultured bacterium F41-01 RepID=I3VIN9_9BACT
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AFK79245.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
L-carnitine dehydratase/bile acid-inducible protein F
BD02T64_scaffold_250_33
unknown

Not on your lists

comp(42968..43243)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

BD02T64_scaffold_250_34
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43526..44620)
-----------------
DNA (1095bp)
protein (365aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=765910 species="Bacteria; Proteob
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000366792E
BD02T64_scaffold_250_35
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44845..46026
-----------------
DNA (1182bp)
protein (394aa)
acyl-CoA dehydrogenase n=1 Tax=Leucothrix mucor RepID=UPI0003B3F779 rbh
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EAW33202.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;
glutaryl-CoA dehydrogenase
BD02T64_scaffold_250_36
Vibrio orientalis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46090..46497)
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 = ATCC 33934 RepID=C9QK50_VIBOR
Uncharacterized protein {ECO:0000313|EMBL:EGU48787.1}; TaxID=675816 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio orientalis CIP 102891 =
PTS system N-acetylglucosamine-specific transporter subunit IIBC
BD02T64_scaffold_250_37
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46890..47147)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00029A8E73
Uncharacterized protein {ECO:0000313|EMBL:KJZ63007.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
hypothetical protein
BD02T64_scaffold_250_38
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47220..47648)
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000363EC75
Uncharacterized protein {ECO:0000313|EMBL:KJS09523.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BD02T64_scaffold_250_39
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(47808..48998)
-----------------
DNA (1191bp)
protein (397aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=4468134 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
propanoyl-CoA C-acyltransferase Tax=GWC2_Rokubacteria_70_16_curated
BD02T64_scaffold_250_40
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49578..50258)
-----------------
DNA (681bp)
protein (227aa)
Methyltransferase type 11 n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LEA0_9GAMM rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EGG94799.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
putative methyltransferase
BD02T64_scaffold_250_41
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50416..51033)
-----------------
DNA (618bp)
protein (206aa)
LPXTG-site transpeptidase family protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KG14_9GAMM rbh
LPXTG-site transpeptidase family protein {ECO:0000313|EMBL:EGG98686.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
sortase family protein, Peptidase C60
BD02T64_scaffold_250_42
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51042..53117)
-----------------
DNA (2076bp)
protein (692aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XEP7_9ALTE
hypothetical protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
conserved hypothetical protein
BD02T64_scaffold_250_43
Vibrio furnissii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53114..53764)
-----------------
DNA (651bp)
protein (217aa)
Outer membrane protein OmpA n=1 Tax=Vibrio furnissii (strain DSM 14383 / NCTC 11218) RepID=F0LUM4_VIBFN
outer membrane protein OmpA
Outer membrane protein OmpA {ECO:0000313|EMBL:ADT86300.1}; TaxID=903510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio furnissii (strain DS
BD02T64_scaffold_250_44
unknown

Not on your lists

comp(53751..53945)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

BD02T64_scaffold_250_45
uncultured gamma proteobacterium EB000_65A11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54107..54808
-----------------
DNA (702bp)
protein (234aa)
Response regulators consisting of a chey-like receiver domain and a winged-helix DNA-binding domain-protein n=1 Tax=uncultured gamma proteobacterium EB000_65A11 RepID=E0Y042_9GAMM
Response regulators consisting of a chey-like receiver domain and a winged-helix DNA-binding domain-protein {ECO:0000313|EMBL:ADI20033.1}; TaxID=710972 species="Bacteria; Proteobacteria; Gammaproteoba
two-component system response regulator
BD02T64_scaffold_250_46
uncultured gamma proteobacterium EB000_65A11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54823..56970
-----------------
DNA (2148bp)
protein (716aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=710972 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="un
Signal transduction histidine kinase n=1 Tax=uncultured gamma proteobacterium EB000_65A11 RepID=E0Y043_9GAMM
sensor histidine kinase
BD02T64_scaffold_250_47
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57092..57691
-----------------
DNA (600bp)
protein (200aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037FFAB8
Uncharacterized protein {ECO:0000313|EMBL:EMR13669.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lo
hypothetical protein
BD02T64_scaffold_250_48
unknown

Not on your lists

comp(58409..58681)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

BD02T64_scaffold_250_49
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59453..60709)
-----------------
DNA (1257bp)
protein (419aa)
Response regulator n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZI02_SHEVD
response regulator
Response regulator {ECO:0000313|EMBL:BAJ01301.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (strai
BD02T64_scaffold_250_50
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60733..65169)
-----------------
DNA (4437bp)
protein (1479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Sh
Signal transduction histidine kinase-like protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FT19_SHESH rbh
Signal transduction histidine kinase-like protein
BD02T64_scaffold_250_51
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65249..66439)
-----------------
DNA (1191bp)
protein (397aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZI00_SHEVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ01299.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (
BD02T64_scaffold_250_52
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66594..68216)
-----------------
DNA (1623bp)
protein (541aa)
cyclohexanone monooxygenase (EC:1.14.13.22)
Putative monooxygenase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZF3_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
BD02T64_scaffold_250_53
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(68820..69551)
-----------------
DNA (732bp)
protein (244aa)
Short-chain alcohol dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J3B0J5_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM38217.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_250_54
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69637..71574)
-----------------
DNA (1938bp)
protein (646aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acsA; acetyl-CoA synthetase (EC:6.2.1.1)
acetyl-CoA synthetase n=1 Tax=Gilvimarinus chinensis RepID=UPI000373D557
BD02T64_scaffold_250_55
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71728..72111)
-----------------
DNA (384bp)
protein (128aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRP6_9GAMM
BD02T64_scaffold_250_56
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72122..73006)
-----------------
DNA (885bp)
protein (295aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
pantoate--beta-alanine ligase n=1 Tax=Microbulbifer variabilis RepID=UPI00036A2CAF
BD02T64_scaffold_250_57
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73047..74414)
-----------------
DNA (1368bp)
protein (456aa)
Replicative DNA helicase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRP8_9GAMM
DNA helicase {ECO:0000313|EMBL:KJS05310.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
replicative DNA helicase
BD02T64_scaffold_250_58
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(74706..75161)
-----------------
DNA (456bp)
protein (152aa)
50S ribosomal protein L9 n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KJR8_SIMAS
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881
BD02T64_scaffold_250_59
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75187..76044)
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRQ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETN91636.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
hypothetical protein
BD02T64_scaffold_250_60
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(76076..76303)
-----------------
DNA (228bp)
protein (76aa)
30S ribosomal protein S18 n=1 Tax=Congregibacter litoralis KT71 RepID=A4A6F8_9GAMM rbh
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litora
SSU ribosomal protein S18P
Displaying items 31-60 of 70 in total

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