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BD02T64_scaffold_656_16

Organism: BD02T64_Colwellia_psychrerythraea_39_150_partial

partial RP 24 / 55 MC: 2 BSCG 27 / 51 MC: 1 ASCG 9 / 38
Location: comp(12922..14280)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 470.0
  • Bit_score: 524
  • Evalue 2.10e-145
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 471.0
  • Bit_score: 512
  • Evalue 9.70e-143
23S rRNA (uracil-5-)methyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037E08DD similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 471.0
  • Bit_score: 517
  • Evalue 1.80e-143

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Taxonomy

Colwellia psychrerythraea → Colwellia → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
GTGGCAAACTTTTTTAAGGCCAGTGATAAAAAAACAACTAAAGCTAAAAGCAAATCAACAATAGTGGTTAATATTGATAAACTTGATATGAATGGTTGTGGTGTTGGCCATTATCAAAACAAAGCAATTTTTATTGATGGCTGTTTACCCCAAGAGAATGTTGAAGCTCGTCTTATTGAACAAAAAAACAAATTTTCTCGAGCTAAACTGCTCAAGGTTAATGTTGCGAGCAGCAATAGAGTAAAAGCGCCGTGCCAACATTTTAATTTTTGTGGTGGCTGTGACTTGCAGCACCTTGATTATAATGAGCAACTAGTTTTTAAGCAGAAAAAAGTCACGGAGCTGTTTTCACGAAGTGGTATGAATAATGTCACCATTAGCCAATTACCGTGGCAAGAGCCTATTGTAAGCCAGCCATGGCATTATCGAAGAAAAGCGCGCATTGGTGTGCAATTTGACAAAAAATCTCAGCCAACGATTGGTTTTCGTCAAAAATCTACTAACCAGTTAGTACCGATAAAGTCATGCACAACGCTAGTGAAACCTCTCAGTGATATTTTTCCTATTCTACAAGCGTTAATAGCCAAGCTGACTATTAAAAAAGCGATTGGCCATATTGAAGTTATCAGCACGCAAACGCAAAGTCGAGAAGCATTAGTTACCCTTGTGATTAGGCAGTTAAGAGTACTTAATGAGCAAGATCGTGCCTTATGGCAGGCGTGTGCAAAGCAGCATCAATGGCAAGTTGTTTTTGATTTTGGTGCCGACAATATTGAACATTTAAACTCTCACCAAGCACTAACGTATCGCTTAGCTAATGATATTGATATCACCTTTGCCAGTGATGATTTCATTCAAGTGAATCAAAATGTGAATGAAGCTATGGTTGAGCAAGCTATTGACTGGCTTGAACTTGAGGCTAATGACCAGCTTTTAGACTTGTTTTGCGGGTTAGGAAATTTCAGTTTACCAATAGCACAAAGAATCGAAAAAGTAGTGGGGGTTGAAGGGGTGCAAACTATGGTTGATAAAGCCAAAGCTAATGCCGCTAAAAACCAATTGAGCAATTGTCAGTTTTATCAGGCGGACTTAAATAGCGCTTGGCTTGAGCACGACTGGGCTAAGCATAACTTTACTAAAGTGTTACTCGATCCTGCCAGAGCAGGGGCAGAACAAGCGGTTTTGCAATTGGCTAAATTAGCCATTAGCACGATTTTATATGTTAGCTGCGATCCCGCCACGCTAGCAAGGGATAGCCAGTTATTACTGGCGCAAGGTTACAAAATTGTAAAAATTGCTTTAATTGACATGTTTTCTCAAACAAAGCATGTTGAGACTATGATATTGTTCAGCAAATAG
PROTEIN sequence
Length: 453
VANFFKASDKKTTKAKSKSTIVVNIDKLDMNGCGVGHYQNKAIFIDGCLPQENVEARLIEQKNKFSRAKLLKVNVASSNRVKAPCQHFNFCGGCDLQHLDYNEQLVFKQKKVTELFSRSGMNNVTISQLPWQEPIVSQPWHYRRKARIGVQFDKKSQPTIGFRQKSTNQLVPIKSCTTLVKPLSDIFPILQALIAKLTIKKAIGHIEVISTQTQSREALVTLVIRQLRVLNEQDRALWQACAKQHQWQVVFDFGADNIEHLNSHQALTYRLANDIDITFASDDFIQVNQNVNEAMVEQAIDWLELEANDQLLDLFCGLGNFSLPIAQRIEKVVGVEGVQTMVDKAKANAAKNQLSNCQFYQADLNSAWLEHDWAKHNFTKVLLDPARAGAEQAVLQLAKLAISTILYVSCDPATLARDSQLLLAQGYKIVKIALIDMFSQTKHVETMILFSK*