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BD02T64_scaffold_656_29

Organism: BD02T64_Colwellia_psychrerythraea_39_150_partial

partial RP 24 / 55 MC: 2 BSCG 27 / 51 MC: 1 ASCG 9 / 38
Location: comp(26917..27522)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor AlgU n=1 Tax=Colwellia piezophila RepID=UPI00035C882F similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 198.0
  • Bit_score: 348
  • Evalue 5.00e-93
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 198.0
  • Bit_score: 346
  • Evalue 2.00e-92
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 198.0
  • Bit_score: 344
  • Evalue 2.70e-92

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Taxonomy

Colwellia psychrerythraea → Colwellia → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGTATGTATAGGAGATATGGCTCAAATGAGCGAACAGAACGTCGACCAAGCGTTGGTTGAAAGAGTGCAAAAAGGCGACAAAAATGCCTTTAACCTGTTAGTAATAAAATATCAGCATAAAGTGGCCAATTTAGTGTCACGCTATGTTAGCAACAGCAGTGATGTGCCAGATATAGTGCAAGAGGCTTTTATTAAAGCTTATCGGGCTTTACCAAATTTTAGAGGCGAAAGCGCATTTTATACTTGGTTATATCGTATTGCCGTTAATTGTGCTAAAAATCATAGTGTTGCTCTTGGTCGTAAACCGCCAAGTAATGATGTTGATGTAGCCGATGCTGAATTTTATGATGGTGGAGATGCGTTAAGAGAAAATGCTTCACCTGAAAAAGTATTATTAACAGAAGAAATTAAAACGATTATTTTTAAAACTATTGAGCAATTACCCGAAGATTTACGTATTGCCATAAACTTTCGTGAAATTGAAGGTTTAAGTTATGAAGAAATAGCCACTATTATGGATTGTCCTGTAGGTACAGTGCGCTCCCGAATTTTTAGAGCTCGTGATGCTATCGATAAAAAGATATCACCCTTGCTTCATAAGTAA
PROTEIN sequence
Length: 202
VVCIGDMAQMSEQNVDQALVERVQKGDKNAFNLLVIKYQHKVANLVSRYVSNSSDVPDIVQEAFIKAYRALPNFRGESAFYTWLYRIAVNCAKNHSVALGRKPPSNDVDVADAEFYDGGDALRENASPEKVLLTEEIKTIIFKTIEQLPEDLRIAINFREIEGLSYEEIATIMDCPVGTVRSRIFRARDAIDKKISPLLHK*