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BD02T64_scaffold_887_21

Organism: BD02T64_Colwellia_psychrerythraea_38_180_partial

partial RP 29 / 55 MC: 4 BSCG 30 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 25840..26436

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-70 factor FecI n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480J1_COLP3 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 167.0
  • Bit_score: 253
  • Evalue 1.70e-64
RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily {ECO:0000313|EMBL:KGJ92012.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 191.0
  • Bit_score: 258
  • Evalue 7.20e-66
RNA polymerase sigma-70 factor FecI similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 167.0
  • Bit_score: 253
  • Evalue 4.70e-65

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Taxonomy

Colwellia psychrerythraea → Colwellia → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAATCCTCAAAATAATAAAAACACGCTTACCGATATATTCATCAGTTATCAAAAAACCATAAGAAGCTTTATAAGTCGTATTGTCAAACCCGATGATATTGATGACATAGTCCAAGAAACTTTTGTTCGTAGCTATGAAGCAAATTTAAAACAAGAAATTAAATACGTCCGTAGTTATATGCTTAAAACAGCCAAAAATATTGCTTTTAACCATAATGCTAAATGGGATAATAAATTCAATGACTCTATAGAGGATTTTGTTGAACCACCTGTCGAATTAAGTAGCAGGAATTTTGAAGATGATTATGAGTCGAAAGAACGTTTCTTATCTTTTTGTCGAGCTACAGAACAACTTTCAGGCTCCGTACGTAAATGTTTCATTTTAAAGAAAGTATACGGTTTGAGCCAAAAAGAAATAGCACAATATTTACAGTTGAGTGAAAGCACGATTGAAAAGCATGTAGCAAAAGGGCTGTTAAAGAGTGTACAATACATGGAAAAAATGCACTATGGCGTAGGTCAAACTTCTATAGCTAAAGAACAATTTACGTCGGAAGAAGCCAGCGCAAAAAATATTGCCAATAAATTCAAGTAA
PROTEIN sequence
Length: 199
MNPQNNKNTLTDIFISYQKTIRSFISRIVKPDDIDDIVQETFVRSYEANLKQEIKYVRSYMLKTAKNIAFNHNAKWDNKFNDSIEDFVEPPVELSSRNFEDDYESKERFLSFCRATEQLSGSVRKCFILKKVYGLSQKEIAQYLQLSESTIEKHVAKGLLKSVQYMEKMHYGVGQTSIAKEQFTSEEASAKNIANKFK*