ggKbase home page

BD02T64_scaffold_41

Search features with annotation key words

Displaying items 61-90 of 290 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_41_61
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

62313..63464
DNA (1152bp) protein (384aa)
ABC transporter ATP-binding protein yadG (EC:3.6.3.31) rbh
ABC transporter, ATP-binding protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3Y4Q7_9FLAO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFE99770.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chrys
BD02T64_scaffold_41_62
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63477..65258
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YRE3_CAPCC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEK23673.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cani
BD02T64_scaffold_41_63
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

65262..66878
DNA (1617bp) protein (539aa)
Dipeptide-binding ABC transporter n=1 Tax=Formosa sp. AK20 RepID=M7MI45_9FLAO
Dipeptide-binding ABC transporter {ECO:0000313|EMBL:EMQ94741.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK2
ABC transporter substrate-binding protein
BD02T64_scaffold_41_64
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66931..67830)
DNA (900bp) protein (300aa)
Outer membrane protein 3a n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP28_9FLAO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO76818.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp
BD02T64_scaffold_41_65
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67842..69023)
DNA (1182bp) protein (394aa)
Bacterial transferase hexapeptide family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EC39_9FLAO rbh
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EGV44012.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source=
glucose-1-phosphate thymidylyltransferase
BD02T64_scaffold_41_66
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(69125..69376)
DNA (252bp) protein (84aa)
50S ribosomal protein L31 n=1 Tax=Joostella marina DSM 19592 RepID=I3C0S9_9FLAO rbh
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM
LSU ribosomal protein L31p
BD02T64_scaffold_41_67
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

69537..70070
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MEV1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EMQ94737.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
BD02T64_scaffold_41_68
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

70114..71067
DNA (954bp) protein (318aa)
Glycosyl transferase family 2 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GF40_LACS5 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:KJD33326.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis
family 2 glycosyl transferase rbh
BD02T64_scaffold_41_69
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71138..72865
DNA (1728bp) protein (576aa)
Putative phosphoglucomutase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP34_9FLAO rbh
phosphoglucomutase
Phosphoglucomutase {ECO:0000313|EMBL:BAO76813.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-
BD02T64_scaffold_41_70
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

72869..74695
DNA (1827bp) protein (609aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KKM5_9FLAO
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:BAO76812.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" s
lipid A export ATP-binding/permease protein MsbA rbh
BD02T64_scaffold_41_71
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

74990..75532
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Formosa sp. AK20 RepID=M7N8F6_9FLAO rbh
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAL63999.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter
RNA polymerase ECF-type sigma factor
BD02T64_scaffold_41_72
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

75563..76057
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7X829_9FLAO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL89400.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
BD02T64_scaffold_41_73
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

76062..76511
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MI31_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ94731.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
BD02T64_scaffold_41_74
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76539..77660)
DNA (1122bp) protein (374aa)
Putative oxidoreductase (Putative secreted protein) n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP39_9FLAO rbh
Putative oxidoreductase (Putative secreted protein) {ECO:0000313|EMBL:EDP70227.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium
BNR repeat-containing glycosyl hydrolase
BD02T64_scaffold_41_75
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77741..78346)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VS31_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR72172.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
BD02T64_scaffold_41_76
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78324..79415)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VQB7_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR72171.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
hypothetical protein
BD02T64_scaffold_41_77
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(79502..80620)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VPK1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR72170.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
hypothetical protein
BD02T64_scaffold_41_78
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80654..81154)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7WZH8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR72169.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
calcium-binding domain-containing protein
BD02T64_scaffold_41_79
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81264..81764)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GF27_LACS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO76798.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp
BD02T64_scaffold_41_80
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81777..82091)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GF26_LACS5 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAL78261.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
BD02T64_scaffold_41_81
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82131..82709)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GF25_LACS5 rbh
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacinutrix sp. (s
BD02T64_scaffold_41_82
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

82862..84076
DNA (1215bp) protein (405aa)
TRNA and rRNA cytosine-C5-methylase n=1 Tax=Formosa sp. AK20 RepID=M7N8E8_9FLAO rbh
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AJR03468.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthini
BD02T64_scaffold_41_83
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

84080..85888
DNA (1809bp) protein (603aa)
Endonuclease I n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VQA5_9FLAO rbh
Endonuclease I {ECO:0000313|EMBL:EPR72161.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotole
endonuclease I
BD02T64_scaffold_41_84
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(85938..87041)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UDZ0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP72248.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
hypothetical protein
BD02T64_scaffold_41_85
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

87138..90875
DNA (3738bp) protein (1246aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:00
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase, synthetase subunit n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7WZG4_9FLAO rbh
BD02T64_scaffold_41_86
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

91022..92794
DNA (1773bp) protein (591aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) rbh
Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP49_9FLAO rbh
Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) {ECO:0000313|EMBL:EDP70236.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacte
BD02T64_scaffold_41_87
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

92936..93388
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP50_9FLAO rbh
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:EDP70237.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-
transcriptional regulator, MarR family
BD02T64_scaffold_41_88
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93390..95798
DNA (2409bp) protein (803aa)
4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP52_9FLAO rbh
4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase {ECO:0000313|EMBL:EDP70238.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" sourc
3-hydroxyacyl-CoA dehydrogenase
BD02T64_scaffold_41_89
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95803..96996
DNA (1194bp) protein (398aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:GAL78274.1}; EC=2.3.1.16 {ECO:0000313|EMBL:GAL78274.1};; EC=2.3.1.9 {ECO:0000313|EMBL:GAL78274.1};; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacter
acetyl-CoA acetyltransferase (EC:2.3.1.16) rbh
3-ketoacyl-CoA thiolase n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VPH2_9FLAO rbh
BD02T64_scaffold_41_90
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

97021..98829
DNA (1809bp) protein (603aa)
Acyl-CoA dehydrogenase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP54_9FLAO rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:BAO76787.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella
butyryl-CoA dehydrogenase rbh
Displaying items 61-90 of 290 in total

View Taxonomy