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BD02T64_Gammaproteobacteria_43_32_partial

BD02T64_Gammaproteobacteria_43_32
In projects: BD02T64

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: BD02T64_UNK

Properties

Avg. coverage: 31.56 Longest contig: 143.32 Kbp Bin length: 5.49 Mbp GC content: 42.91 %
Contigs count: 205 Features count: 4776 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 MC: 2 BSCG 26 / 51 MC: 3 ASCG 11 / 38 MC: 2
Displaying items 101-150 of 205 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BD02T64_scaffold_5496
Class: Gammaproteobacteria (94.12%)
17 12475 bp 43.64 29.43 90.32
BD02T64_scaffold_4105
Order: Alteromonadales (50%)
16 15087 bp 42.96 32.37 82.34
BD02T64_scaffold_2129
Class: Gammaproteobacteria (87.5%)
16 20345 bp 43.27 30.11 95.43
BD02T64_scaffold_2761
Class: Gammaproteobacteria (66.67%)
15 16265 bp 42.48 32.94 94.80
BD02T64_scaffold_3803
Class: Gammaproteobacteria (73.33%)
15 16118 bp 40.69 30.69 86.34
BD02T64_scaffold_3858
Class: Gammaproteobacteria (100%)
15 15094 bp 45.58 30.27 82.74
BD02T64_scaffold_3879
Class: Gammaproteobacteria (93.33%)
15 16787 bp 45.77 28.62 91.30
BD02T64_scaffold_3465
Class: Gammaproteobacteria (64.29%)
14 13138 bp 42.58 29.49 84.90
BD02T64_scaffold_1928
Class: Gammaproteobacteria (50%)
14 22143 bp 42.77 31.66 87.22
BD02T64_scaffold_2794
Class: Gammaproteobacteria (50%)
14 16108 bp 40.37 35.91 93.66
BD02T64_scaffold_3001
Class: Gammaproteobacteria (71.43%)
14 16752 bp 43.15 32.74 85.91
BD02T64_scaffold_3264
Class: Gammaproteobacteria (92.86%)
14 13982 bp 42.86 32.36 88.96
BD02T64_scaffold_3551
Class: Gammaproteobacteria (78.57%)
14 17476 bp 43.56 31.81 92.39
BD02T64_scaffold_3342
Class: Gammaproteobacteria (57.14%)
14 18173 bp 42.46 30.40 94.64
BD02T64_scaffold_1268
Class: Gammaproteobacteria (85.71%)
14 30816 bp 43.58 30.23 91.70
BD02T64_scaffold_3097
Class: Gammaproteobacteria (50%)
14 14705 bp 41.96 32.61 91.74
BD02T64_scaffold_2673
Class: Gammaproteobacteria (92.86%)
14 16692 bp 44.63 31.39 88.35
BD02T64_scaffold_896
Class: Gammaproteobacteria (50%)
14 39483 bp 41.99 29.03 96.10
BD02T64_scaffold_5253
Order: Alteromonadales (57.14%)
14 8583 bp 40.25 33.14 73.37
BD02T64_scaffold_3506
Class: Gammaproteobacteria (84.62%)
13 12996 bp 44.35 35.11 85.36
BD02T64_scaffold_2561
Class: Gammaproteobacteria (53.85%)
13 17352 bp 44.28 27.34 82.87
BD02T64_scaffold_4656
Class: Gammaproteobacteria (69.23%)
13 17343 bp 43.04 31.42 85.88
BD02T64_scaffold_2991
Class: Gammaproteobacteria (61.54%)
13 15163 bp 43.01 33.24 93.11
BD02T64_scaffold_5307
Class: Gammaproteobacteria (83.33%)
12 12887 bp 43.04 30.53 91.25
BD02T64_scaffold_6223
Class: Gammaproteobacteria (58.33%)
12 8003 bp 44.30 33.79 92.85
BD02T64_scaffold_3710
Class: Gammaproteobacteria (72.73%)
11 12349 bp 43.98 32.20 95.59
BD02T64_scaffold_4352
Class: Gammaproteobacteria (63.64%)
11 10472 bp 42.64 33.43 83.94
BD02T64_scaffold_5326
Class: Gammaproteobacteria (81.82%)
11 8451 bp 44.46 30.10 75.33
BD02T64_scaffold_1718
Class: Gammaproteobacteria (90.91%)
11 24392 bp 42.13 32.21 94.99
BD02T64_scaffold_2368
Class: Gammaproteobacteria (63.64%)
11 18575 bp 42.40 30.22 92.71
BD02T64_scaffold_7002
Class: Gammaproteobacteria (72.73%)
11 10702 bp 42.09 27.60 86.34
BD02T64_scaffold_5955
Phylum: Proteobacteria (90.91%)
11 11884 bp 44.71 29.45 86.64
BD02T64_scaffold_3162
Class: Gammaproteobacteria (63.64%)
11 14442 bp 42.74 30.60 92.31
BD02T64_scaffold_3679
Class: Gammaproteobacteria (63.64%)
11 18604 bp 42.10 31.84 93.63
BD02T64_scaffold_4086
Class: Gammaproteobacteria (70%)
10 11186 bp 43.59 31.62 88.93
BD02T64_scaffold_5833
Class: Gammaproteobacteria (50%)
10 11456 bp 44.48 30.65 94.61
BD02T64_scaffold_4447
Class: Gammaproteobacteria (50%)
10 10220 bp 40.68 29.91 78.52
BD02T64_scaffold_3369
Class: Gammaproteobacteria (70%)
10 16127 bp 43.41 28.98 92.01
BD02T64_scaffold_6520
Class: Gammaproteobacteria (70%)
10 6834 bp 43.77 32.07 90.39
BD02T64_scaffold_3913
Class: Gammaproteobacteria (50%)
10 13200 bp 42.66 28.42 85.41
BD02T64_scaffold_3664
Class: Gammaproteobacteria (70%)
10 12483 bp 42.72 26.42 72.34
BD02T64_scaffold_10005
Class: Gammaproteobacteria (55.56%)
9 4291 bp 43.72 29.89 69.07
BD02T64_scaffold_5045
Class: Gammaproteobacteria (66.67%)
9 8957 bp 43.42 32.32 91.87
BD02T64_scaffold_3508
Phylum: Proteobacteria (55.56%)
9 12994 bp 44.08 29.16 85.98
BD02T64_scaffold_4624
Class: Gammaproteobacteria (77.78%)
9 9799 bp 43.43 32.80 86.21
BD02T64_scaffold_5353
Class: Gammaproteobacteria (88.89%)
9 8405 bp 43.94 29.64 77.20
BD02T64_scaffold_4227
Class: Gammaproteobacteria (100%)
9 10801 bp 44.17 30.96 93.38
BD02T64_scaffold_5718
Class: Gammaproteobacteria (77.78%)
9 7837 bp 42.64 32.52 84.71
BD02T64_scaffold_7652
Class: Gammaproteobacteria (87.5%)
8 5703 bp 42.64 33.27 88.01
BD02T64_scaffold_5572
Class: Gammaproteobacteria (75%)
8 8065 bp 42.28 30.99 85.15
Displaying items 101-150 of 205 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.