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ACD3_17_21

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(20256..20879)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=121 evalue=1.6e-07) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-07
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=7 to=30 evalue=0.0012 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-03

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Taxonomy

ACD3 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGAATTCAAGATTAAAACAACATTGATTTACTCTAATTGAGCTTATAGTAGCGGTTACGATACTCGCTTTTGTAATGCTTTCGGTATTTGTAATTTATTCGAATATACTTCAGATAAACAAGAAGCTGGAATTGAACAGGATACTTCAAGAGAACACGAGAACAATGATAGAATGACTCGCCTCCGATATAAGAACCAAATGATTGGCATACTGATATTATAACAATGTAACAACACAGCCACTGGATTATTCCGGAAATTGAAATACTATTCTTGCAATAAAAGATAGAGATGATTTGGCAAACCCAAATGTATACTGCATGCAGAAGCAAAAGATCAATTGCGACAATTCTTGTTATACGAATCCAAAATGATGTTATCTTTGAAAGCTTAATTCAGATATAAAACTTAGCGATGATAGGGTTGAGGTCAATAATCTAAGGTTTTATATTTCTTGAAAACCTTCTCAGGATATCACAAATGAGGATAAAGAATGAAAGGTCACTGTGGTATTTGATTTAAGCCTTGCTCCTGGAAAATGAATAAGCAGAGCATTGGCAAAGGAAAATGAACTGCATATCCAAACTACAATAAGTGAAAAAGTTTATAAAAATATGAAATAA
PROTEIN sequence
Length: 208
MNSRLKQHGFTLIELIVAVTILAFVMLSVFVIYSNILQINKKLELNRILQENTRTMIEGLASDIRTKGLAYGYYNNVTTQPLDYSGNGNTILAIKDRDDLANPNVYCMQKQKINCDNSCYTNPKGCYLGKLNSDIKLSDDRVEVNNLRFYISGKPSQDITNEDKEGKVTVVFDLSLAPGKGISRALAKENELHIQTTISEKVYKNMK*