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08E140C01_10kDa_scaffold_932_21

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 18040..18474

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SBN6_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 285
  • Evalue 2.20e-74
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 285
  • Evalue 3.10e-74
fliA; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 284
  • Evalue 1.80e-74

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGTCAGCGATGCCATTCGTGTCGTTGAAGCAAGAACTGGGCGTGACGCTAAAGATCACGAGGTCGCGGCCGAACTCCAATTGAGTCTGGAGGATTACTACGGCATTCTTGGCGACACTTTGGGCAGCCGCCTGTTCAGCTTCGACGACCTGTTGCAGGACGGCGAGCATGGCGGGTTGCACGAAGACGCCGGACACACTCACCTCGAACCTTCGCGGGACCTCGAAGACGAACGCTTCCAGGCGGCCTTGGCCGATGCCATCGCCGGTTTGCCGGAGCGCGAACGTCTGGTGCTGGCGCTGTATTACGATGAAGAACTGAACTTGAAGGAAATCGGTGAAGTGCTGGGGGTTAGCGAGTCACGCGTGAGCCAGTTGCACAGCCAGTGCGCGGCGCGTCTGCGCTCGCGGCTGAGTGAATGGCGTGCTGGCTGA
PROTEIN sequence
Length: 145
MVSDAIRVVEARTGRDAKDHEVAAELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEHGGLHEDAGHTHLEPSRDLEDERFQAALADAIAGLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRLSEWRAG*