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BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_stutzeri_63_190_partial

BJP_08E140C01_10KDA_Pseudomonas_stutzeri_63_191
In projects: BJP_08E140C01_10KDA  |  horonobe_genomes

Consensus taxonomy: Pseudomonas stutzeri  →  Pseudomonas  →  Pseudomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Missing SCGs, no others available

Displaying items 201-250 of 957 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
08E140C01_10kDa_scaffold_32184
Species: Pseudomonas stutzeri (100%)
2 1658 bp 63.81 173.61 88.84
08E140C01_10kDa_scaffold_3771
Species: Pseudomonas stutzeri (81.25%)
16 12087 bp 57.92 173.68 84.61
08E140C01_10kDa_scaffold_12586
Species: Pseudomonas stutzeri (100%)
1 2141 bp 67.16 173.75 96.26
08E140C01_10kDa_scaffold_27987
Species: Pseudomonas stutzeri (100%)
1 1000 bp 66.20 173.85 97.50
08E140C01_10kDa_scaffold_26769
Species: Pseudomonas stutzeri (100%)
2 1046 bp 66.92 173.95 99.81
08E140C01_10kDa_scaffold_17009
Species: Pseudomonas stutzeri (80%)
10 5277 bp 61.08 173.99 86.87
08E140C01_10kDa_scaffold_5685
Species: Pseudomonas stutzeri (100%)
17 15396 bp 62.80 174.21 91.43
08E140C01_10kDa_scaffold_35835
Species: Pseudomonas stutzeri (100%)
2 1318 bp 61.08 174.24 60.09
08E140C01_10kDa_scaffold_27841
Species: Pseudomonas stutzeri (100%)
2 1006 bp 61.13 174.30 50.70
08E140C01_10kDa_scaffold_8218
Species: Pseudomonas stutzeri (100%)
3 4072 bp 62.92 174.39 94.30
08E140C01_10kDa_scaffold_22948
Species: Pseudomonas stutzeri (100%)
3 1604 bp 60.22 174.41 92.58
08E140C01_10kDa_scaffold_21197
Species: Pseudomonas stutzeri (50%)
2 1303 bp 65.69 174.41 100.15
08E140C01_10kDa_scaffold_21731
Species: Pseudomonas stutzeri (100%)
1 1271 bp 63.10 174.43 99.84
08E140C01_10kDa_scaffold_9563
Genus: Pseudomonas (60%)
5 5545 bp 52.44 174.54 85.70
08E140C01_10kDa_scaffold_13506
Species: Pseudomonas stutzeri (100%)
3 2638 bp 60.08 174.56 93.82
08E140C01_10kDa_scaffold_12068
Species: Pseudomonas stutzeri (100%)
5 3833 bp 62.41 174.65 84.45
08E140C01_10kDa_scaffold_15665
Species: Pseudomonas stutzeri (100%)
2 1744 bp 66.51 174.77 71.04
08E140C01_10kDa_scaffold_8864
Species: Pseudomonas stutzeri (83.33%)
6 4057 bp 60.71 174.81 97.90
08E140C01_10kDa_scaffold_30748
Species: Pseudomonas stutzeri (100%)
1 1602 bp 57.74 174.81 64.42
08E140C01_10kDa_scaffold_27607
Species: Pseudomonas stutzeri (100%)
1 1014 bp 65.48 174.85 99.70
08E140C01_10kDa_scaffold_17431
Species: Pseudomonas stutzeri (100%)
2 1569 bp 60.74 174.86 92.93
08E140C01_10kDa_scaffold_6624
Species: Pseudomonas stutzeri (91.67%)
12 15609 bp 62.40 174.86 87.76
08E140C01_10kDa_scaffold_24121
Species: Pseudomonas stutzeri (100%)
1 1152 bp 63.28 174.87 100.00
08E140C01_10kDa_scaffold_7924
Species: Pseudomonas stutzeri (100%)
6 4243 bp 58.12 174.89 86.68
08E140C01_10kDa_scaffold_22317
Species: Pseudomonas stutzeri (100%)
2 1240 bp 64.76 174.92 85.89
08E140C01_10kDa_scaffold_32091
Species: Pseudomonas stutzeri (100%)
2 1498 bp 63.22 175.23 67.69
08E140C01_10kDa_scaffold_23000
Species: Pseudomonas stutzeri (100%)
2 1205 bp 61.49 175.27 85.64
08E140C01_10kDa_scaffold_4305
Species: Pseudomonas stutzeri (66.67%)
9 7547 bp 67.96 175.28 88.29
08E140C01_10kDa_scaffold_20913
Species: R_Pseudomonadales_64_12 (50%)
2 1320 bp 64.70 175.34 89.32
08E140C01_10kDa_scaffold_18467
Species: Pseudomonas stutzeri (66.67%)
3 2572 bp 58.75 175.37 88.88
08E140C01_10kDa_scaffold_7595
Species: Pseudomonas stutzeri (100%)
9 6587 bp 60.71 175.39 88.22
08E140C01_10kDa_scaffold_22505
Species: Pseudomonas stutzeri (100%)
2 1229 bp 56.06 175.51 94.22
08E140C01_10kDa_scaffold_22540
Species: Pseudomonas stutzeri (100%)
1 1227 bp 67.16 175.55 99.76
08E140C01_10kDa_scaffold_5983
Species: Pseudomonas stutzeri (80%)
5 4132 bp 57.02 175.67 95.47
08E140C01_10kDa_scaffold_25531
Species: Pseudomonas aeruginosa (50%)
2 1092 bp 62.82 175.69 92.86
08E140C01_10kDa_scaffold_12909
Species: Pseudomonas stutzeri (83.33%)
6 4621 bp 61.85 175.77 86.86
08E140C01_10kDa_scaffold_19544
Species: Pseudomonas stutzeri (100%)
4 1778 bp 65.92 175.98 84.36
08E140C01_10kDa_scaffold_7684
Species: Pseudomonas stutzeri (92.31%)
13 12405 bp 59.89 175.99 83.65
08E140C01_10kDa_scaffold_26354
Species: Pseudomonas stutzeri (100%)
2 1821 bp 61.94 176.36 71.33
08E140C01_10kDa_scaffold_2972
Species: Pseudomonas stutzeri (100%)
12 14102 bp 60.18 176.38 85.48
08E140C01_10kDa_scaffold_19846
Species: Pseudomonas stutzeri (100%)
4 3122 bp 64.57 176.38 90.04
08E140C01_10kDa_scaffold_18222
Species: Pseudomonas stutzeri (100%)
4 2727 bp 63.70 176.40 98.90
08E140C01_10kDa_scaffold_14232
Species: Pseudomonas sp. 1-7 (50%)
2 1913 bp 62.62 176.42 99.43
08E140C01_10kDa_scaffold_8135
Species: Pseudomonas stutzeri (100%)
7 5121 bp 60.69 176.42 88.93
08E140C01_10kDa_scaffold_18686
Genus: Pseudomonas (66.67%)
3 1467 bp 59.85 176.58 97.34
08E140C01_10kDa_scaffold_5729
Species: Pseudomonas stutzeri (50%)
8 8409 bp 63.41 176.74 79.99
08E140C01_10kDa_scaffold_33502
Species: Pseudomonas stutzeri (100%)
2 1429 bp 62.42 176.98 92.58
08E140C01_10kDa_scaffold_25765
Species: Pseudomonas xanthomarina (50%)
2 1083 bp 61.13 177.01 73.41
08E140C01_10kDa_scaffold_25523
Species: Pseudomonas xanthomarina (100%)
1 1093 bp 68.07 177.04 98.81
08E140C01_10kDa_scaffold_9957
Species: Pseudomonas stutzeri (100%)
3 4667 bp 62.01 177.19 78.74
Displaying items 201-250 of 957 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.