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bjp_ig2103_scaffold_708_21

Organism: BJP_Ig2103_Hor_218_2014_Bacteroidetes_44_10_partial

partial RP 31 / 55 MC: 5 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: 22187..22813

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=12 Tax=Thermoanaerobacter RepID=RS4_THEP3 id=5223087 bin=16ft_combo_ws3_JS1 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 210.0
  • Bit_score: 263
  • Evalue 1.70e-67
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 208.0
  • Bit_score: 253
  • Evalue 4.90e-65
Tax=BJP_IG2102_BRC1_58_13 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 420
  • Evalue 1.50e-114

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Taxonomy

BJP_IG2102_BRC1_58_13 → BRC1 → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCTCGTTACGTTGACGCCAAATGCCGGCTTTGCCGGCGTGAGGGAATGAAGCTCTTCCTCAAAGGCACCCGCTGTTTTTCTTCAAAGTGCGCCATCGAGCGCCAAAATTATCCGCCCGGCCAGCACGGTCAGGCGCGGACTAAGATTACCACCTACGGCCAGCAACTTCGTGAGAAGCAGAAGGCCAAGCGCACGTACGGCATTCTCGAGCGCCAGTTCCGTCGGTATTTCGCCATGGCCGATTCGTATCGGGGTGTGACGGGTACTGTGCTGCTGCAAATGCTCGAACGTCGTCTCGACAATATTGTCTACCGTCTCGGCATCGGCGCCTCGCGCGCTCAGGCCCGCCAGTTTGTCAACCACGGCCATGTGTTCGTTAATGGCCGCCGGGTTAACATCCCGTCGTTCCTGGCCAAGCCCGGCGATGAGATCGTGCTTGCGGAAGGTTCGCGCGTAAATCAAATGATCATCGCAAACCTCGAAGATGCCAAGAGTCGTGGCCGCCTGGCCTGGCTCGACTGGAATCCGGAGACGTTTTCAGGCAAGATGCTCAGCATCCCCTCGCGTGAAGACATCCCCACCGAGGTCAATGAGCAGTTGATCGTCGAGCTTTACTCGAAATAA
PROTEIN sequence
Length: 209
VARYVDAKCRLCRREGMKLFLKGTRCFSSKCAIERQNYPPGQHGQARTKITTYGQQLREKQKAKRTYGILERQFRRYFAMADSYRGVTGTVLLQMLERRLDNIVYRLGIGASRAQARQFVNHGHVFVNGRRVNIPSFLAKPGDEIVLAEGSRVNQMIIANLEDAKSRGRLAWLDWNPETFSGKMLSIPSREDIPTEVNEQLIVELYSK*