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bjp_ig2103_scaffold_728_24

Organism: BJP_Ig2103_Hor_218_2014_Acetobacterium_woodii_44_33_partial

partial RP 31 / 55 MC: 1 BSCG 31 / 51 ASCG 10 / 38 MC: 1
Location: comp(19915..20793)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DEV6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 290.0
  • Bit_score: 267
  • Evalue 2.10e-68
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQF26063.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 290.0
  • Bit_score: 267
  • Evalue 3.00e-68
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 293.0
  • Bit_score: 237
  • Evalue 5.10e-60

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 879
ATGGACTTAAAGCAATTAAAAACCTTTGTGGTTTTGTCAAAGAATAAAAACTATACCCGAACAGCTGATGAGCTCGGCTACGCTCAATCCAGTATTTCTGCTCAAATTCAGCAATTGGAGCAGGAACTGAACACAAAACTCCTTGATCGGATTGGAAGGAAGGTTTTTCTTACAGAGTCGGGGGAGCAATTGCTGCCATACGCCATTGAAATGTTGGCACTGGCTTCAACTATCAGAGATAAACTTGACAACGACCATTCATCTCCTGGCCGAATTATTGTAGGCGCCTCCGAATCTTTGTGTATTTTTAAGCTTCCGGCGATCGTAGAATCGTTTCGACAATCCCATCCAAACATTGAACTTCACTTAGAACTCATTGAAAATGCGCAAGTCGTGGAGCAGTTGACAAGCAACGCTATCGATGTCGCATTAACGATCGGAAATTCCATTGAACATCCCGCAATAACCTCATTTTTAAAAAAGCGCGAGGAAGTTCTGGTTCTTTCCGCACCAACACATTCGTTGCGATCAAAGAATGCGTTGGCGATAACAGATTTCGCCAATCAGTCATTCCTTCTGACAAGCACTAGCTGCAATTATCGTGAGACGTTTGAATGCGATTTAAAATCTCACGGAATTCCTTATCAAGTGACTCTAGAATCCGGAAGTGTTCAAGTAATAAAAAAAATGGCAATCAGCGGTATGGGTCTGTGCGTACTTCCCCGTCTGGCAGTTCAGGAAGAACTGAACACAGACTTATTAGCTGCGCTGCCATATAAAAATGATTACAAAGTGTACTCCCAGCTCTTCTGCCATGCTTCAAAGTGGCTATCGCCTAACTTAACCGACTTTATTGACCTTGTTATAAAATTGATTTAA
PROTEIN sequence
Length: 293
MDLKQLKTFVVLSKNKNYTRTADELGYAQSSISAQIQQLEQELNTKLLDRIGRKVFLTESGEQLLPYAIEMLALASTIRDKLDNDHSSPGRIIVGASESLCIFKLPAIVESFRQSHPNIELHLELIENAQVVEQLTSNAIDVALTIGNSIEHPAITSFLKKREEVLVLSAPTHSLRSKNALAITDFANQSFLLTSTSCNYRETFECDLKSHGIPYQVTLESGSVQVIKKMAISGMGLCVLPRLAVQEELNTDLLAALPYKNDYKVYSQLFCHASKWLSPNLTDFIDLVIKLI*