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bjp_ig2103_scaffold_2011_10

Organism: BJP_Ig2103_Hor_218_2014_Acetobacterium_woodii_44_33_partial

partial RP 31 / 55 MC: 1 BSCG 31 / 51 ASCG 10 / 38 MC: 1
Location: 7537..7887

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGU5_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 109.0
  • Bit_score: 124
  • Evalue 6.80e-26
RNA polymerase sigma factor SigZ similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 109.0
  • Bit_score: 124
  • Evalue 1.90e-26
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABW18639.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 109.0
  • Bit_score: 124
  • Evalue 9.50e-26

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGAATTTAGCGGACCTCTTAATAAGGTACATTATCAAACGTGTTGCCAACGCGGAAGATGCGGAAGATATTTTGCAGGAGGTCTTTCTCAAGATCCATAACAACCTGAAGAATCTGGAAGATGAAAAAAAGATTCATGCCTGGATCTATACCATCGCCCGGAATACCATTGCCGATTACTATCGAAAAAATAGCAGAATGCCGGAGCTCACTGAGCTCGATGAAAATATTTCAGAAAACAATTCGTTGGAATTAACGGCCAGCCTGGAAATTGCCGCATGTCTCCAGGGGATGATCGACAATCTGCCTGAGAAATATAAAGTGGTAATTCTGCAGTCTGAGTTTGCATAG
PROTEIN sequence
Length: 117
MNLADLLIRYIIKRVANAEDAEDILQEVFLKIHNNLKNLEDEKKIHAWIYTIARNTIADYYRKNSRMPELTELDENISENNSLELTASLEIAACLQGMIDNLPEKYKVVILQSEFA*