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bjp_ig2103_scaffold_3082_14

Organism: BJP_Ig2103_Hor_218_2014_Acetobacterium_woodii_44_33_partial

partial RP 31 / 55 MC: 1 BSCG 31 / 51 ASCG 10 / 38 MC: 1
Location: 17595..18746

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDM4_ACEWD similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 383.0
  • Bit_score: 698
  • Evalue 3.80e-198
  • rbh
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 383.0
  • Bit_score: 698
  • Evalue 1.10e-198
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium wood similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 383.0
  • Bit_score: 698
  • Evalue 5.30e-198

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Taxonomy

Acetobacterium woodii → Acetobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAAACTAGAGAAAGCAAAAACCGACGATGTGATCATAGATATTGACGACGACATCATTGAGATTGAAAAAGTCGCAATTGAGCTGATGCCGGAAGTGCAGCAGCTGTTAAAGCGCGGGAAATCAAAAGGAAATTTAAATAATCACGATTTTGAAGAACTTCTGGATAAGGCTGATCTTGATCCCGAAGAAATTGATTCAATCTATTTGTACCTGCAAAAGGAAGGAATCGAAATCGCCTTTACCGATCTCGAACTAGAAGCCCTGGAAGCCGCAGAACTGGAAGAAGAAAACCAGAAAGAACTTGAACTGGCTGACTCGGTCAGTGTCAATGACCCGGTTCGTTTATATCTCAAAGAAATTGGTAAGGTCCCCTTATTGACGGGTGATGAAGAAATGGCCCTGGCCCGCCGGATGGAAGCAGGCGACGATTCGGCAAAAAAAGAATTGGCCGAAGCCAACCTGCGTCTGGTCGTCAGTATTGCCAAACGTTATGTGGGACGGGGGATGTCGTTTCTGGATCTGATCCAGGAAGGAAATCTGGGTTTGATCAAAGCGGTTGAAAAATTCGACTATACCAAGGGTTTTAAATTCAGTACCTACGCCACCTGGTGGATTCGTCAGGCGATTACCCGAGCGATTGCCGATCAGGCCAGAACCATCCGGATTCCGGTTCATATGGTCGAGACCATTAATAAACTGATCCGGGTTTCCCGACAATTGTTGCAGGAATATGGACGGGAACCGACCCCGGCAGAAATTGGCAAGGAAATGGGTTTTTCAGAAGAAAAGGTTCGTGAGATACAAAAAATTGCCCAGGATCCGGTTTCTCTGGAAACACCAATCGGGGAAGAAGAGGATAGCCATTTGGGTGATTTCATTCCTGACGAAGATGCCCCGGCACCAGCCGAAGCCGCATCTTATGCGCTGTTGAAAGAACAGCTGATTGAGGTCTTAAACACCCTGACCGAACGGGAAGAAAAGGTGCTGCGATTGCGCTTTGGCCTCGATGATGGCCGGGCCCGGACTTTGGAAGAAGTCGGCAAAGAGTTCAATGTTACCCGTGAACGAATCCGTCAGATTGAAGCCAAGGCCTTACGCAAACTGAGACATCCCAGCCGCAGCAAGAAATTAAAGGATTACCTAACCTAA
PROTEIN sequence
Length: 384
MKLEKAKTDDVIIDIDDDIIEIEKVAIELMPEVQQLLKRGKSKGNLNNHDFEELLDKADLDPEEIDSIYLYLQKEGIEIAFTDLELEALEAAELEEENQKELELADSVSVNDPVRLYLKEIGKVPLLTGDEEMALARRMEAGDDSAKKELAEANLRLVVSIAKRYVGRGMSFLDLIQEGNLGLIKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQEYGREPTPAEIGKEMGFSEEKVREIQKIAQDPVSLETPIGEEEDSHLGDFIPDEDAPAPAEAASYALLKEQLIEVLNTLTEREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLT*