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bjp_ig2103_scaffold_8_curated

Search features with annotation key words

Displaying items 181-210 of 344 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_8_curated_181
unknown

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comp(237803..238618)
DNA (816bp) protein (272aa)
peptidase M55 D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein id=44515 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
peptidase M55 D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein
bjp_ig2103_scaffold_8_curated_182
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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238676..240787
DNA (2112bp) protein (704aa)
UvrABC system protein B n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S8S8_CALKI rbh
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 /; I77R1B).;"
bjp_ig2103_scaffold_8_curated_183
unknown

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241291..242403
DNA (1113bp) protein (371aa)

This feature has no annotations

bjp_ig2103_scaffold_8_curated_184
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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242410..243054
DNA (645bp) protein (215aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
Phosphate propanoyltransferase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L676_9BACI
pduL; propanediol utilization protein; K15024 propanediol utilization protein
bjp_ig2103_scaffold_8_curated_185
unknown

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243096..243392
DNA (297bp) protein (99aa)
microcompartments protein id=12554589 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein; K04028 ethanolamine utilization protein EutN
bjp_ig2103_scaffold_8_curated_186
unknown

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243464..243745
DNA (282bp) protein (94aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHE5_HALO1 id=5224079 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ethanolamine utilization protein EutN/carboxysome structural protein Ccml; K04028 ethanolamine utilization protein EutN
bjp_ig2103_scaffold_8_curated_187
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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243782..245188
DNA (1407bp) protein (469aa)
Aldehyde Dehydrogenase n=1 Tax=Thermincola potens (strain JR) RepID=D5XBV5_THEPJ rbh
Aldehyde Dehydrogenase; K13922 propionaldehyde dehydrogenase rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADG81503.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
bjp_ig2103_scaffold_8_curated_188

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245275..246588
DNA (1314bp) protein (438aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DBV3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD83974.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ethanolamine utilization Fe-S center protein rbh
bjp_ig2103_scaffold_8_curated_189
unknown

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246599..247156
DNA (558bp) protein (186aa)
Microcompartments protein n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1U015_MARAV
microcompartments protein
bjp_ig2103_scaffold_8_curated_190
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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247156..247605
DNA (450bp) protein (150aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:ADG83731.1}; EC=5.3.1.26 {ECO:0000313|EMBL:ADG83731.1};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Thermincola potens (strain JR) RepID=D5XDI5_THEPJ
bjp_ig2103_scaffold_8_curated_191
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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248030..249175
DNA (1146bp) protein (382aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
phosphopentomutase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000381F850 rbh
phosphopentomutase rbh
bjp_ig2103_scaffold_8_curated_192
unknown

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comp(249246..250775)
DNA (1530bp) protein (510aa)
transmembrane_regions 5..22 id=46878 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_193
unknown

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comp(250814..252058)
DNA (1245bp) protein (415aa)
transmembrane_regions 7..26 id=46880 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_194
unknown

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253098..254438
DNA (1341bp) protein (447aa)
seg 81..95 id=44089 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_195
unknown

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comp(254779..255324)
DNA (546bp) protein (182aa)
TPR-like id=44090 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_196
unknown

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comp(255326..256459)
DNA (1134bp) protein (378aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=44091 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] rbh
bjp_ig2103_scaffold_8_curated_197
unknown

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comp(256456..257466)
DNA (1011bp) protein (337aa)
tjr:TherJR_1188 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=46164 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
queA; S-adenosylmethionine tRNA ribosyltransferase-isomerase rbh
bjp_ig2103_scaffold_8_curated_198
unknown

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comp(257456..258475)
DNA (1020bp) protein (340aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSI0_9FIRM id=46163 bin=ACD39 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
cell envelope-related transcriptional attenuator
bjp_ig2103_scaffold_8_curated_199
unknown

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comp(258567..259658)
DNA (1092bp) protein (364aa)
Probable nicotinate-nucleotide adenylyltransferase id=3765805 bin=GWC2_ACD39_50_8 species=Erysipelotrichaceae bacterium 3_1_53 genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
nicotinate (nicotinamide) nucleotide adenylyltransferase/conserved hypothetical protein TIGR00488
bjp_ig2103_scaffold_8_curated_200
unknown

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comp(259655..260938)
DNA (1284bp) protein (428aa)
GTPase obg id=3765806 bin=GWC2_ACD39_50_8 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
GTPase obg; K03979 GTP-binding protein rbh
bjp_ig2103_scaffold_8_curated_201
unknown

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261436..262542
DNA (1107bp) protein (369aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=3765807 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
DegT/DnrJ/EryC1/StrS aminotransferase rbh
bjp_ig2103_scaffold_8_curated_202
unknown

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262650..264614
DNA (1965bp) protein (655aa)
gumC2; protein GumC2 (EC:2.7.10.1)
GumC2 id=3765808 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_203
unknown

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264683..265228
DNA (546bp) protein (182aa)
hypothetical protein; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Peptidase A24A prepilin type IV id=3765809 bin=GWC2_ACD39_50_8 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_204
unknown

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265443..266456
DNA (1014bp) protein (338aa)
Flp pilus assembly protein RcpC/CpaB n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QKY6_VIBOR id=45580 bin=ACD39 species=Vibrio orientalis genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
Flp pilus assembly protein CpaB
bjp_ig2103_scaffold_8_curated_205
unknown

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266459..268132
DNA (1674bp) protein (558aa)
Type IV pilus secretin PilQ id=3765811 bin=GWC2_ACD39_50_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ
bjp_ig2103_scaffold_8_curated_206
unknown

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268198..269403
DNA (1206bp) protein (402aa)
response regulator receiver protein id=3765812 bin=GWC2_ACD39_50_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
response regulator receiver protein; K02282 pilus assembly protein CpaE
bjp_ig2103_scaffold_8_curated_207
unknown

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269422..270792
DNA (1371bp) protein (457aa)
Type II secretion system protein E id=3765813 bin=GWC2_ACD39_50_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
bjp_ig2103_scaffold_8_curated_208
unknown

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270797..271849
DNA (1053bp) protein (351aa)
Type II secretion system F domain protein id=3765814 bin=GWC2_ACD39_50_8 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
type II secretion system F domain protein; K12510 tight adherence protein B
bjp_ig2103_scaffold_8_curated_209
unknown

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271860..272801
DNA (942bp) protein (314aa)
Type II secretion system F domain protein id=3765815 bin=GWC2_ACD39_50_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
type II secretion system F domain-containing protein; K12511 tight adherence protein C
bjp_ig2103_scaffold_8_curated_210
unknown

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272805..273173
DNA (369bp) protein (123aa)
Putative secreted protein id=3765816 bin=GWC2_ACD39_50_8 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Displaying items 181-210 of 344 in total

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