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bjp_ig2103_scaffold_74_curated_82

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 97151..97675

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor AlgU id=4805500 bin=GWC2_ACD39_50_8 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 325
  • Evalue 3.00e-86
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 82
  • Evalue 1.10e-13
similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 325
  • Evalue 6.10e-86

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 525
ATGAGTTACCGAAATCTGGAAGTAGATCCTGAATTTCTTTTATCTCTTAAAAGGCAGGATAGTAAGGCGTTTGAAACGTTGTTTCACGAATGTGCTGGTCTGGTATTTTCTATTGCGCTGAGCCTGCTCGGAAAGAGACCAGCAGCCGAAGACGCGGTTCAGGAAATTTTTTTTAAGGCCTACCGGGCATTGCCAGATTTCAAAGGGGAGAAGTTGGCTTCATGGCTGGGAAAAATTGCTCACAATCATTGCGTAGACCTTATTCGACAGACTAATCGCGAGGTTCCCACTACAACAGTGCCTGTTGAAGATTTACATCTTCATCAATCTAATTCGGTCATAGATGAGCTGCCAGACTTTATAAATTCTCTTTCGGAAACTGAACGCGAAGTCGTGATTTTGAAAAAGATAGAGGGACTTAGTTACAAAGAGATTTCTTTGCTGACTGGTAAAAAAGAGGGAACTTTGAGAAATATGGTCCTCAAGTGCCTGCAATCTCTAAGGGAAATAGTCGATGAAAGCTGA
PROTEIN sequence
Length: 175
MSYRNLEVDPEFLLSLKRQDSKAFETLFHECAGLVFSIALSLLGKRPAAEDAVQEIFFKAYRALPDFKGEKLASWLGKIAHNHCVDLIRQTNREVPTTTVPVEDLHLHQSNSVIDELPDFINSLSETEREVVILKKIEGLSYKEISLLTGKKEGTLRNMVLKCLQSLREIVDES*