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bjp_ig2103_scaffold_3_curated_450

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(548261..549121)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=3303577 bin=GWC2_ACD39_50_8 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 287.0
  • Bit_score: 552
  • Evalue 1.90e-154
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 271.0
  • Bit_score: 223
  • Evalue 8.30e-56
similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 287.0
  • Bit_score: 552
  • Evalue 3.90e-154

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 861
ATGGCAAGTATTTATAATCATGATCGGGAAAATGACAGTCAACTGCTTAAGAGCTACTTCAAAGACCTTAAGAAGCACCCTCCTCTCTCCCGAGAAGAAGAGATAGCACTTCTCAGACAGGTCCAGGAGGGCAGCCCTCGCGCCCGTTCTCGTTTGATTCTCGCAAATCTTAGATTTGTGGTGGCAGTGGCCAAACGCTATCGACATATCAACGAGGTGCCGTTTGAAGACCTTATCGCGGTTGGCAACCTCGGCCTCATGCGTGCTGCGCAGAGGTTTGACTGCGACAAGAATGTGCGCTTCATTTCGTATGCAGTCTGGTGGATTCGCCAGGCAATGATTCAGATGGTTTCCAGTCATGGCAACCCGATTCGTCTCCCGCTGAATCGCGTGCACACCGGCCTGAAGATCAAAAAGGTCGAAGAAACCCTTATTAAGAAGCTTAACCGGCGCCCAACTCTCGATGAACTCGCCGAGGGCGTTATGATGAAACCTAAGGATCTGCGCAAATTCATGCGCGACATCCCGAATGTCGTGTCAATGGATACCACTCCTGTAGACCCCGAGGAAGACCTCTTTCTTCGCGATGTTATCACCGACAATGAGTCTGACCCTCTTGTCGAAGCCGAAAAGAAGGCTCTCGACGGCGAACTTGAAAAGGTTCTTGATTCGTTGACCGACCGTGAACGCGTAGTACTCATGCATCGTTTCGGCCTGCATGACACCAAGTCATACACTCTTGAGGAAATTGGCAAACTGCTTGGCGTTACCCGCGAGCGTGTGCGCCAGATCGAGTCGCAGGCTCTTGCTAAGCTGCGCAACCCGCGGCGTTGCGAAAACCTGCATACTTACCTGACCTGA
PROTEIN sequence
Length: 287
MASIYNHDRENDSQLLKSYFKDLKKHPPLSREEEIALLRQVQEGSPRARSRLILANLRFVVAVAKRYRHINEVPFEDLIAVGNLGLMRAAQRFDCDKNVRFISYAVWWIRQAMIQMVSSHGNPIRLPLNRVHTGLKIKKVEETLIKKLNRRPTLDELAEGVMMKPKDLRKFMRDIPNVVSMDTTPVDPEEDLFLRDVITDNESDPLVEAEKKALDGELEKVLDSLTDRERVVLMHRFGLHDTKSYTLEEIGKLLGVTRERVRQIESQALAKLRNPRRCENLHTYLT*