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bjp_ig2103_scaffold_8_curated_238

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 306372..306947

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW id=4579651 bin=GWC2_ACD39_50_8 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 192.0
  • Bit_score: 356
  • Evalue 1.70e-95
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 189.0
  • Bit_score: 122
  • Evalue 1.70e-25
similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 192.0
  • Bit_score: 356
  • Evalue 3.60e-95

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 576
ATGAACAAGCACGAAAGAACCGATCAAGAACTGGTTCAGGCAGTTCTGGCAGGCGAACTCGAAACCTTCGCCGAACTGGTTGAACGCTACGAAAGGCTGGTATTCAGCTTTCTGCTGACACGACTCAATGATCTGCAGGAGGTCGAAGACATTGTTCAAGAAACGTTTGTCAAGGCTTTCAGGCACCTGGCCAGTTTTGACTGCGAGCGACGGTTTGCCGCGTGGCTGCTTACAATCGCCCGCAACCTGCTGATAGATTCCCGACGTAAAGCTGGTAGAAGTGTAGCTTCGACAAATCTGGTAAACGAGGTAATGCTTACCGACAGCGCCCGGGAAGCAGGATCTCAGCCCTCCGAGATCGTGGTAAGGCGCGAAAGGTTCAGAAGTATAGTTGTTATGATTCAGGAGCTTCCGGAAGAACTCAGAACGCCGTTTCTGATGCGGGTGATCAATGAACTGCCCTACCAGGAAATCGCAGAGATTCTCGATGTGCCGCTACAGACGGTAAAGAACAGAATCTTCAAGGCCAGAGGTATCCTCCGGGAAAAAAGAGAAAACTATGAAAAGATGTCCTGA
PROTEIN sequence
Length: 192
MNKHERTDQELVQAVLAGELETFAELVERYERLVFSFLLTRLNDLQEVEDIVQETFVKAFRHLASFDCERRFAAWLLTIARNLLIDSRRKAGRSVASTNLVNEVMLTDSAREAGSQPSEIVVRRERFRSIVVMIQELPEELRTPFLMRVINELPYQEIAEILDVPLQTVKNRIFKARGILREKRENYEKMS*