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bjp_ig2103_scaffold_13_curated_42

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 62415..62909

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3297064 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 163.0
  • Bit_score: 298
  • Evalue 4.90e-78
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 171.0
  • Bit_score: 87
  • Evalue 5.30e-15
similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 163.0
  • Bit_score: 298
  • Evalue 9.90e-78

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 495
ATGTTCGCCGAGATGCAGCGCCGCTACCAGGGGCTGGTCTACTCGGTGATCTACGGCGTCACTCTCGATGCCTCAGAAAGCTGGGACCTGACACAGGAAGTCTTTGTTAAAGCCTATGAATGCACTGATTTCTGGGGCGCTGGCTTTCACCAGAAGGCCTGGCTGGTAACGGTTGCCCGCAACGAAGCGCTTAAATACCGGCGCAGCCTCAAAAGTCGCCTGCGTTATCTTGTCAGATTCTGCGGGCTGGAAGGGGCCAGCGATGCCCGCGAGCTCGAAAACCGGCTGATTCGCGCCGAAGATGTCGCGCGTCTGCGTGAGCTTCTCGCGAAACTCGATGACGAAGAGCGCCAGATCATCACCTTGCGTTTCAGCGCTGAAATGAGTTACCAGCAGATAGCCGACGAGATGGGCTTGAAAATCGGCACGGTGATGTCGCGCCTGTCGCGTCTTAAAGAGCGACTTGGCCTTGAATTCGCGGAGGAAGAATCATGA
PROTEIN sequence
Length: 165
MFAEMQRRYQGLVYSVIYGVTLDASESWDLTQEVFVKAYECTDFWGAGFHQKAWLVTVARNEALKYRRSLKSRLRYLVRFCGLEGASDARELENRLIRAEDVARLRELLAKLDDEERQIITLRFSAEMSYQQIADEMGLKIGTVMSRLSRLKERLGLEFAEEES*