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bjp_ig2103_scaffold_243_curated_29

Organism: BJP_Ig2103_Hor_218_2014_Dechloromonas_63_51_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(27969..29267)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 430.0
  • Bit_score: 679
  • Evalue 8.40e-193
  • rbh
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 430.0
  • Bit_score: 679
  • Evalue 5.40e-192
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RLMD_DECAR similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 430.0
  • Bit_score: 679
  • Evalue 2.70e-192
  • rbh

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Taxonomy

Dechloromonas aromatica → Dechloromonas → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
GTGCCGACAGGGGTCATAGAGTCGCTGGATCATGAGGCGCGGGGCATTGCCCGTCAGGAAGGCAAGACGATCTTCGTCGATGGCGCGTTGCCCGGCGAGCTTGTCGATTACGCCAGTTTCCGGAAAAAGCCGAATTACGAGCTGGCGCATCTGGTTGCCGTCAAGCGCGCCTCATCGGCCCGCGTTACACCGCGTTGCCCCCATTTCGGCATCTGTGGCGGCTGCGCCATGCAGCATATGGACCCGATGGCCCAGGTGGCGGCCAAACAGCGTGTGCTCGAGGACAGTCTGTGGCATATCGGGCGCGTTCGCCCGGAAACCATCCTGTCGCCGGTCTATGGCGAGCCATGGGCTTACCGGCATCGGGCCCGCCTCGGGGTGCGCCAGATCGAGAAAGAAGGCGGCATACTGATTGGCTTTCATGAATGGCGCAGCAGCTACATAGCCGACATTCGGCGCTGCGATATCCTGCCAGCGCACGTTTCAGCGCTGTTGTTGCCGATGCGCGAATTGTTTGCCGCGCTGTCCGTCGCCGGGCGTCTGCCGCAGGTTGAGGTCGCCGTCGGCGAGGCGTGTACGGCCTTGGTGCTCCGTATTCTCCAGCCGCTCAGCCAGCGCGATGAAAAATTGCTGCGCGAATTCGCCGATTGGCATGCTGTGGTGATCTATTTGCAGCCGAAGGGGCCGGACAGCGCTTACCTGTTTCATCCGCAGTCGGCGCCGCCACTAAGTTATTCTTTGCCCGAGTTCGACGTTCAACTGGAATTCCGGCCGACTGATTTCACCCAGGTCAATCATGCGGTGAATCGCATTCTCGTACGCCGCGCCTTGAATTTGCTCGATCCGCAGCTAGGCGAGCGGATTGCCGACATGTTCTGCGGCCTGGGTAACTTCACCTTGCCGATCGCCCGTTCGGGAGCGTTCGTTGTTGGCGTCGAAGGCAGCCCCGGCCTAGTCCTGCGGGGCGAAGCGAGCGCCGCCGCCAATGGCCTGAGTTCTCGGGTGGAGTTTTCCGTGGCCAATCTGTTCAACTGTACCGAGGCGTCGTTGGCGGCGCTCGGGCGATTTGACAAGATGCTGATCGATCCGCCGCGCGAAGGCGCCATGGAATTGATCAAGGCCCTAGGCAGCGATGCCCCCCGGCGTATTGTTTATGTCTCCTGCAATCCCTCTACCCTGGCTCGCGATGCAGCCATTCTGGTCGCGGCCAAGGGTTACCGTTTCCTTGCCGCTGGTGCCGTCAACATGTTCCCGCATACGGCTCATGTCGAGTCGGTGGCACTATTCGAGCGCCAATGA
PROTEIN sequence
Length: 433
VPTGVIESLDHEARGIARQEGKTIFVDGALPGELVDYASFRKKPNYELAHLVAVKRASSARVTPRCPHFGICGGCAMQHMDPMAQVAAKQRVLEDSLWHIGRVRPETILSPVYGEPWAYRHRARLGVRQIEKEGGILIGFHEWRSSYIADIRRCDILPAHVSALLLPMRELFAALSVAGRLPQVEVAVGEACTALVLRILQPLSQRDEKLLREFADWHAVVIYLQPKGPDSAYLFHPQSAPPLSYSLPEFDVQLEFRPTDFTQVNHAVNRILVRRALNLLDPQLGERIADMFCGLGNFTLPIARSGAFVVGVEGSPGLVLRGEASAAANGLSSRVEFSVANLFNCTEASLAALGRFDKMLIDPPREGAMELIKALGSDAPRRIVYVSCNPSTLARDAAILVAAKGYRFLAAGAVNMFPHTAHVESVALFERQ*