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bjp_ig2103_scaffold_2098_curated_10

Organism: BJP_Ig2103_Hor_218_2014_Methanoregula_55_19_curated

near complete RP 35 / 55 MC: 8 BSCG 22 / 51 MC: 1 ASCG 38 / 38
Location: 7491..8045

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 1.00e-83
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HAR8_METFS similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 5.10e-84
  • rbh
3-isopropylmalate dehydratase, small subunit similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 1.60e-84
  • rbh

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Taxonomy

Methanoregula formicica → Methanoregula → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 555
ATGGCAGCAAAGAAGACGGTGCCGGTCAGGAAGGTTAAGGAATCCGAGGGGCCGGTTGCAAAGAATGCCCGGGCATGGAAGTTCGGCGACGACATCGACACCGATGCCATCATCCCCGGCCGGTTCCTCATCATCAACAACCCCGATGAACTCGGGAAGCACGCATTTGAAGGCACAAGGGACGAGTTTGCAAAGAAGGTGCAGCAGGGGGACGTGATTGTCGGGGGACGGAACTTCGGCTGCGGCTCATCCCGCGAGCACGCCCCGCTTGCCCTCATCGGGGCCGGCGTCAAAGTGGTGGTTGCCCGATCGTTTGCCCGGATCTTCTTCCGGAACTCGATCAATGTAGGGGTACTTCCCGTGGTGTGCCCGGATGCCGACAAGATCGCCGACGGGGCGAAGATCGGCCTCAATATCAAAGAGGGGAACGTCGTGGCTGACGGAAAGACCTATGCCATCGAGCCGGTGCCTGCGTTCATGCAGGGCATCATCGACGCCGGCGGGCTTGTGGAATATGCAAAGAACGTCAAGGAGTTACCAACATGTACAAGATAG
PROTEIN sequence
Length: 185
MAAKKTVPVRKVKESEGPVAKNARAWKFGDDIDTDAIIPGRFLIINNPDELGKHAFEGTRDEFAKKVQQGDVIVGGRNFGCGSSREHAPLALIGAGVKVVVARSFARIFFRNSINVGVLPVVCPDADKIADGAKIGLNIKEGNVVADGKTYAIEPVPAFMQGIIDAGGLVEYAKNVKELPTCTR*