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RifSed_csp2_16ft_3_scaffold_998_18

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(13136..13822)

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein MA_1979 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Y1979_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 228.0
  • Bit_score: 313
  • Evalue 9.10e-83
DNA replication and repair protein RadC {ECO:0000313|EMBL:KCZ72187.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 228.0
  • Bit_score: 398
  • Evalue 3.90e-108
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 228.0
  • Bit_score: 313
  • Evalue 2.60e-83

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 687
ATGGAGGAATATAAGCTCAGGATACTTGACATGAAAAAAGAGGAGAGACCGAGGGAGAGACTCGTGAAGAACGGACCTTCTGCATTGAGCGATTCTGAACTCCTTGCGATCATCCTCAGGACGGGTACAAAACAGGAGAATGTGATAAACCTCTCCCAGAGGATATTATCAGAATACAACTTAAAACAGCTTTCCACAACAAGTCTCGATCAATTGACCAGGATACACGGGATCAAAGAAAGCAAGGCTGCGCAGATCGCAGCATGTTTTGAGATTGCGCGAAGGCTTGAATCTTTCATTGAAGAGGAAAAACCCAAAATCAACTCTCCAGAAGATGTCTACAGACGGATCTACCCGAGAATGAGGGAGCAGAAAAAAGAGAATTTCATAGAGCTATGCCTTGATACCAAGAACCAGATTATCAAGGAAGAGACTATTTCCATAGGCTCTCTCAACGCCAATATAGTTCATCCAAGAGAGGTTTTCAAGACTGCTCTGGCAGTATCAGCTGCCCATATTATAGTGACGCATAATCATCCTTCAGGCGATCCCTCACCGAGCAGAGAGGATATCGAGATAACAAGGAAACTTGTCGAGACCGGAAAGATCATAGGGATCAATGTACTTGACCATGTCATAATCGGGGATGGGCGGCACTTCAGCATGAAAGAGGCAGGACATATTTGA
PROTEIN sequence
Length: 229
MEEYKLRILDMKKEERPRERLVKNGPSALSDSELLAIILRTGTKQENVINLSQRILSEYNLKQLSTTSLDQLTRIHGIKESKAAQIAACFEIARRLESFIEEEKPKINSPEDVYRRIYPRMREQKKENFIELCLDTKNQIIKEETISIGSLNANIVHPREVFKTALAVSAAHIIVTHNHPSGDPSPSREDIEITRKLVETGKIIGINVLDHVIIGDGRHFSMKEAGHI*