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RifSed_csp2_16ft_3_scaffold_3176_4

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 4657..5571

Top 3 Functional Annotations

Value Algorithm Source
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 331.0
  • Bit_score: 414
  • Evalue 1.20e-112
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4) similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 284.0
  • Bit_score: 285
  • Evalue 1.70e-74
RNA 3'-terminal phosphate cyclase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RTCA_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 284.0
  • Bit_score: 285
  • Evalue 6.00e-74

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 915
ATGAAGCTGGACGGGTCATATGGAGAAGGAGGAGGTCAGATATTAAGAACAGCGGTAGCACTTTCGGCTGTGACCGGAAAACCCGTGGAGATCGAAAGCATAAGAAAGGCAAGACCGAAACCTGGGCTGGCAGCGCAGCATGTGAAAGCAGTGGAGAGCGCTGCAGCATTGTGCGGAGCAGATGTCAGGGGCTGCTCGCTTCGTTCTACCAGCCTGAGCTTTATTCCCGGGAAAATAAGAGCAGGGACATTCGATATAGATATCGGCACAGCAGGCAGCATAACACTTCTGCTTCAGTGCCTGATGCCAGCTGCCATGCATGCTCCCGGTGCTGTCAGGTTGAAAATTACAGGAGGAACTGACGTATTGTGGTCACCGTCCTTTGATTATCTGAGATATGTGGCTCTTTTTGCACTTTCGCGGACGGGATACAGATGCGATATACATCTCGCACACAGAGGATACTATCCAGAGGGAAAAGGTCATGTCGAGGCGACAATCTATCCCTCTGAATTGGAACAAGTAAGTTTTGATAACAATACGTGTGCTGCCATAGAGGGGATTTCCCATTCATCAGGCTTACCTTCCCATGTGGTGGAAAGACAGGCTTCAAGCGCAGAAAAAATACTGACGCAGGCAGGTTATGATACCAGGATCTCCCGCGAAATCAAAGATGAACGATCAACCGGGAGCGGGATAACGCTGTGGTGCGGGACTGCTGGAGGGAGCGCCCCTGGTAAACGGGGTTTAAGAGCTGAAAAAGTAGGCAGCATTGCGGCCGGAGGTTCTTTTACGGCAAGGACGATCACTCCTCATACAAGGACGAATATATGGGTAACAGAGCAGTTTCTTGATGTGAAGTTCAATATAGAAGAACTGGAGACCGGATTATTCCGTGTCTCGCTTCAACCATAA
PROTEIN sequence
Length: 305
MKLDGSYGEGGGQILRTAVALSAVTGKPVEIESIRKARPKPGLAAQHVKAVESAAALCGADVRGCSLRSTSLSFIPGKIRAGTFDIDIGTAGSITLLLQCLMPAAMHAPGAVRLKITGGTDVLWSPSFDYLRYVALFALSRTGYRCDIHLAHRGYYPEGKGHVEATIYPSELEQVSFDNNTCAAIEGISHSSGLPSHVVERQASSAEKILTQAGYDTRISREIKDERSTGSGITLWCGTAGGSAPGKRGLRAEKVGSIAAGGSFTARTITPHTRTNIWVTEQFLDVKFNIEELETGLFRVSLQP*