ggKbase home page

RifSed_csp2_16ft_3_scaffold_11947_4

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(3432..4769)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 445.0
  • Bit_score: 787
  • Evalue 7.60e-225
Metallo-beta-lactamase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL5_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 445.0
  • Bit_score: 681
  • Evalue 4.20e-193
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 445.0
  • Bit_score: 681
  • Evalue 1.20e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1338
TTGACAGAAATAGGAATTATCGCAGTCGGTGGTTACAATGAGATGGGTAAAAACATGACTGGGATCAGGATTGGTAATGATATCATCGTGATGGATATGGGACTGCAGCTTGACAGGGTTCAGATACATGAAGATGTGGAAATAGATAAGATGCATTCAATGGACCTGATAAAGATGGGCGCAATCCCTGATGACACTGTTATGAACGAGGTCAGCGGCACTGTGAAAGCTATTGTATGCACGCACGGTCATCTCGACCATATCGGAGCGATACCGAAACTGGCACATAGATACAAAGCGCCGATAATCGCGACACCATATACCTCGGAATTGATCAAGCATGAGATATCGGATGAGCAGAAGTTTGATGTGAATAACCAGGTGATCTCGCTCAAGATCGGGGGCAGATACAACCTGACGCCTGATGTACAGGTCGAGTTCATCCGCATGCAGCACAGCATAGTGGATTCAGCTTTCGCTGCGATCCATACACCGGAAGGGATATTGCTGTATGCAAGCGATTTCAAATTAGACCGTACACCTACCCTGGGTGAACCTCCTGATTTCCAGAGACTTCGTAAATTGGGAAAAGAAGGAGTAAAAGCGATGATCACAGAGAGCACGAATTCAGGGCACTCAGGTAAGACCCCCTCAGAGCAGATAGCAAAAGATCTGGTACGCGATGTGCTTCTCGGGACAGAAGAGACAAAATCAGGCGTCGTGATTACCACTTTTTCTTCGCATGTGGCGCGCATCAATGCCATAATCCAGGCAGCAGAGGAGATGGAAAGGATCCCTGTGCTTCTCGGACGGTCTATGGAGCGCTATCTTTCAATAGCAGAGAAAATGAAATACATAAAATTCCCTGAAAATCTCGAAATTCATGGCAGCAGGAATGCTGTGGATAAAGCCCTGAAACGCATATCCCAGGACGGGAAACGAAAATATCTCCCGATCATTACGGGTCATCAGGGTGAACCTGACAGCATCCTCACAAGGATTGCAAACGGGGAGACGGCTTATAAGATTGAAAGAGGCGACAAGGTCATATTTTCAGCGAATGCAATTCCAAACCCTATGACACTGGCGAACAGGTATGCAATGGAAACAAAACTGAAAATGCAGGGAGCGCGAATCTACGATAATGTCCATGTATCAGGGCATGCATCGAGAGAGGACCACTGGGAACTTCTCAGGATGATATCGCCGGAGCAGGTCATACCCTCGCATGGCAACATGACCATGCATTCATGCTATGTCGAGATGGCAGAGGATGCAGGATATATCTTTGGCGACACCGTGCATATAATGAGAAACGGTGAGGAGATGATCCTGTGA
PROTEIN sequence
Length: 446
LTEIGIIAVGGYNEMGKNMTGIRIGNDIIVMDMGLQLDRVQIHEDVEIDKMHSMDLIKMGAIPDDTVMNEVSGTVKAIVCTHGHLDHIGAIPKLAHRYKAPIIATPYTSELIKHEISDEQKFDVNNQVISLKIGGRYNLTPDVQVEFIRMQHSIVDSAFAAIHTPEGILLYASDFKLDRTPTLGEPPDFQRLRKLGKEGVKAMITESTNSGHSGKTPSEQIAKDLVRDVLLGTEETKSGVVITTFSSHVARINAIIQAAEEMERIPVLLGRSMERYLSIAEKMKYIKFPENLEIHGSRNAVDKALKRISQDGKRKYLPIITGHQGEPDSILTRIANGETAYKIERGDKVIFSANAIPNPMTLANRYAMETKLKMQGARIYDNVHVSGHASREDHWELLRMISPEQVIPSHGNMTMHSCYVEMAEDAGYIFGDTVHIMRNGEEMIL*