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RifSed_csp2_16ft_3_scaffold_14790_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(6347..7330)

Top 3 Functional Annotations

Value Algorithm Source
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 308.0
  • Bit_score: 505
  • Evalue 3.30e-140
hydroxymethylbilane synthase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 306.0
  • Bit_score: 358
  • Evalue 1.30e-96
Probable porphobilinogen deaminase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E721_METMS similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 306.0
  • Bit_score: 358
  • Evalue 4.60e-96

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 984
ATGAATATTTCAAACGATGTGCTCAGGATAGGGACAAGAGGCAGCAAGCTTGCGCTCGCACAGGCAAATCTCGTAAAAGACCTTCTTGAGAAAAAAGGCATCAGAACAGAGCTGAAGATCATCAAGACCTGCGGTGATACGTTCACAGACAGACCTCTTCATGAGGTCACAGGTTTCGGGGTTTTTGTTCGTGAAATAGACGATGCCATGCTTGCAGGCAAGATCGAGATGGCGGTTCACAGTATGAAGGATGTGCCTACCGAGCGCCCGCAAGAGCTCGCAATCGCTGCGGTTATGAAGCGGGATTCTCCCTATGACTTTCTGCTCACGCGTGATGGAACAAAACTAAAAGACCTTCCCTCAGGCTCGACCATCGGGACCACAAGCCTTCGAAGAAGAGCCCAGCTTATGAGAGTCAGACCTGACCTGAACATGAAGGAACTGCGGGGAAATATTGATACAAGGCTCAGGAAGTTAAGGGAAGGGAAGTATGACGGCATATTCATGGCAGAGGCGGGACTTGAGAGGATGAAATGGGACATTCAGGGCGAGCGCCTTGACCCTGACGATTTCGTTCCTTCTGCAAACCAGGGGACAGTTGTGATCGCTGCGAAAAAAGATTCAGAGGCAGAGCGGGTTTCCAGATCACTGGACGATGAAAAGACGCGCATGGAGACCAGGATCGAGCGTATCATTATCGGGATACTGGGTGGAGGCTGTCTTGTACCCATAGGTGCTTTTGCAGAGACAGAAGGAGATGATATCCATGTTCGAGCCGAGGTTCTTTCTGTTGATGGAAAACGCTGGATAAAAATAGATGAATTTATAAACCCAGTCGAATATGAGCATGAGGCAGAGCGCCTCGGAAATGAACTTAAGCAAAAAGGCGGAGGCGAGCTTGTTGAAGAAGCAGTGAAAATGTTCGCAGCAAAACGAGGAAATCATGACTGGAAAAGTTTATCTTGTGGGCTCAGGTCCTGGTGA
PROTEIN sequence
Length: 328
MNISNDVLRIGTRGSKLALAQANLVKDLLEKKGIRTELKIIKTCGDTFTDRPLHEVTGFGVFVREIDDAMLAGKIEMAVHSMKDVPTERPQELAIAAVMKRDSPYDFLLTRDGTKLKDLPSGSTIGTTSLRRRAQLMRVRPDLNMKELRGNIDTRLRKLREGKYDGIFMAEAGLERMKWDIQGERLDPDDFVPSANQGTVVIAAKKDSEAERVSRSLDDEKTRMETRIERIIIGILGGGCLVPIGAFAETEGDDIHVRAEVLSVDGKRWIKIDEFINPVEYEHEAERLGNELKQKGGGELVEEAVKMFAAKRGNHDWKSLSCGLRSW*