ggKbase home page

RifSed_csp2_16ft_3_scaffold_16667_2

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 3217..5667

Top 3 Functional Annotations

Value Algorithm Source
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:KCZ72628.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ72628.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 816.0
  • Bit_score: 1297
  • Evalue 0.0
UPI0003D1AC73 related cluster Tax=unknown RepID=UPI0003D1AC73 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 823.0
  • Bit_score: 877
  • Evalue 9.60e-252
Putative ski2-type helicase similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 824.0
  • Bit_score: 880
  • Evalue 3.20e-253

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2451
ATGCTTTCTGTCATAATCCATCCGCAAGAATCAAAAATCCTCGTTCTACCGATAAAAGATAACGGGCAGGAACCACTTTTTCAAGGCATACTGACATTAAAGAATACTCCAAAAGGCCCTCGAGCTGGCAAATTCAGGATAAAAAAGGGAGAAACGGAGGAGTTAAGAGCACCAGACGAGTTGATCGAACTTCTGCGCCTTGCAGACGGGATCCTTTTTGCAGAAGGGAATGAGAGATCCGAAGCTGAGTTCAAGGAACTGCTTACAGCGTATCAGCTTGACTATGGATATACAGACGCCTGTCGTCTGTGCCTTCTTGCCGGCAGACATACCACGATAGATAATAAATCCATCAGATTTCATAATGAATCAATATGTGAGGAGTGCGCGAAAAAAGAACTGATAAAGGAAATAAGATCATGTAAAATAGGAAGACTCGGCCAGGAAAGGCTTATCCAGATCTTACTTGATACCAGAAACCTTGACAGGGTACTTGCGATGCTTAGTCCGGAAAAACTTGATTCAGGCTTGACGAAATTCGATACTATCCAGGCAAGCAAAGTTACCAGCACATTTAAAGTTAAAGACCTGCCAATCCATGAAGAACTTAAAAAAATACTTGGTCAATCACTTGAAAAATTATTGCCTGTTCAGTCTCTATCCGTAAAAGCAGGGCTTCTCGAAGGGAAAAATCAACTGATTGTTTCTGCCACAGCAACAGGAAAAACGCTTGTGGGAGAACTTGCGGGCATCCAGAATTCACTTGACAAAAAAGGCAAACTCCTCTTCCTTGTACCTCTGGTCGCACTTGCAAACCAGAAGTATGAGCAGTTCACCAGGCGTTATTCTTCTATCGCAACTGTGTCATTGCGCATTGGAACGAGCCGTATAATAAAAAACAACAAAGATGTCCTGACCTCGCTCTCTTCTGATATCATCGTTGGTACTTACGAAGGGATAGACTTCATCCTCAGATCAGGTAATGCAAAGAAACTCGGGAAGATAGGGACAGTGGTCATAGATGAAGTTCACATGCTTGAAGATAAAGAAAGGGGTCACAGGCTCGATGGCATTATCGCGCGTTTGAAATTCATTGCACAGGATGCGCAGTTCGTATATCTTTCAGCCACAGTCGGAAAACCAGAGTGGCTGGCTCAAAAATTATCAGCGACACTGGTCGAGTTCGAGGAAAGACCTGTACCCATCGAACGCCACCTGATCTTCACACATGAATACGAGAAAAAGCGCTTGATCGAGAGGCTCGCAAAACAGGAATTTGATAAGAAGTCCTCCAGAGGTTTCAGGGGACAGACCATCGTGTTCACCAACTCGCGCAAGAACTGCCATATACTTGCAGACAGCCTCAGGATCAAAGCCATGCCATATCATGCAGGTCTCTCGTACATAGAGCGAAAAAAAGTGGAAGTTAAATTCGGAAAAGGTGAACTTCCTGTGGTTGTGACCACGGCAGCTCTTGCCGCAGGAGTGGATTTCCCCGCCTCGCAGGTGATATTCGAATCACTTGCCATGGGCATCGAATGGCTGACCGTACGGGAGTTCCAGCAGATGCTCGGGCGTGCAGGAAGACCGGATTACCATGACCGCGGGGTCGTGGTGCTTCTGGCTGACCCTGAAAAGAGGTTCGGGAAAGGAGAGACAGAGGACGAAATAGCATTCAGGCTGCTGCGCGGTGAACTGGAGCATTTCGGCGTGGATTACGGGGATGATGAGCTGCTTGAGGAAACTCTCTGCAATATCGTGGTCGCGCACAGATTACAGGATATAAGGAAACTGAATGAACTTCTGCTTGGTGAGGGAGACCCTGATTACCTTCTGAAAAAACTCACAGAATACGGGTTCATTGAAAAGACGAATGCGCAATTTTCTCCAACTGGGCTTGGAAATATAGTGGCATCACATTTCCTCAGCGTTGAGCAGACCTTTCTGATAAAGGAAGCAGTCCTGAAAGGGACAGAGCCAATGGATATAGTGACAGAGCTTGGAACCCTGGACTCTGTATATTTCAGGTATGCTTCGCAGTTGTCGGACGCGCTTGGGACAGACATACCCGCACGTGTTTTCGGAGCCGGGCTTGATATCGTTTTCTCTGCAGATGGATTTTCGAAGCTGAAAGAGAACCTGCGCCGCACCATGCTTGATTTTGCACGGGAATTCATGGCGTGCACATGCAAAGATTCACCATACTGCGGATGTGCAGAAAAAAAGTTCTCTGCAGGGGTGATAGAGCTTTGCGCAGAAGGACTTTCCCCGGTCAGGATCGTGGCAGAGCTCACAAAGAGGTATGGGGTTTTTGCATACGATGGCGACATACTGAACTACCTTGATCAGGCGGCAAGGAACCTTGAGGCTGTGGAATTGATAGCCAGGATATATGGGAAAAAAGATCTGAGCGAGGAAGCGATGGGGTTGAGGAAGAGAATGGAAGGTTGA
PROTEIN sequence
Length: 817
MLSVIIHPQESKILVLPIKDNGQEPLFQGILTLKNTPKGPRAGKFRIKKGETEELRAPDELIELLRLADGILFAEGNERSEAEFKELLTAYQLDYGYTDACRLCLLAGRHTTIDNKSIRFHNESICEECAKKELIKEIRSCKIGRLGQERLIQILLDTRNLDRVLAMLSPEKLDSGLTKFDTIQASKVTSTFKVKDLPIHEELKKILGQSLEKLLPVQSLSVKAGLLEGKNQLIVSATATGKTLVGELAGIQNSLDKKGKLLFLVPLVALANQKYEQFTRRYSSIATVSLRIGTSRIIKNNKDVLTSLSSDIIVGTYEGIDFILRSGNAKKLGKIGTVVIDEVHMLEDKERGHRLDGIIARLKFIAQDAQFVYLSATVGKPEWLAQKLSATLVEFEERPVPIERHLIFTHEYEKKRLIERLAKQEFDKKSSRGFRGQTIVFTNSRKNCHILADSLRIKAMPYHAGLSYIERKKVEVKFGKGELPVVVTTAALAAGVDFPASQVIFESLAMGIEWLTVREFQQMLGRAGRPDYHDRGVVVLLADPEKRFGKGETEDEIAFRLLRGELEHFGVDYGDDELLEETLCNIVVAHRLQDIRKLNELLLGEGDPDYLLKKLTEYGFIEKTNAQFSPTGLGNIVASHFLSVEQTFLIKEAVLKGTEPMDIVTELGTLDSVYFRYASQLSDALGTDIPARVFGAGLDIVFSADGFSKLKENLRRTMLDFAREFMACTCKDSPYCGCAEKKFSAGVIELCAEGLSPVRIVAELTKRYGVFAYDGDILNYLDQAARNLEAVELIARIYGKKDLSEEAMGLRKRMEG*