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RifSed_csp2_16ft_3_scaffold_39937_6

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 3340..5514

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:KCZ72001.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KCZ72001.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 727.0
  • Bit_score: 1350
  • Evalue 0.0
Type I site-specific deoxyribonuclease, HsdR family Tax=Nitrolancetus hollandicus Lb RepID=I4EFG5_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 727.0
  • Bit_score: 1130
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 728.0
  • Bit_score: 1060
  • Evalue 0.0

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2175
ATGAGTGACTACTCCGAGGACTCCCTTGTCGAGCAGCCAGCAATCGAACTCTTCAGCCAGCTTGGCTGGCAGAACGCCAACTGCTTCTACGAAAAGTTCGGAGAAAACGGCACGCTCGGGCGCGAAACCTCCAGCGAAGTCGTCCTCCTCCCCCGCCTGCGAGCCGCGCTTATGCGACTGAATCCTGATCTGCCCTCAGAGGCGATTGCGCTCGCAATCGAAGAGCTCACCTGCGACCGCAGCGTCATGAGCCCTGCAAATGCCAACCGTGAGGTCTACCGACTGCTCAAGAACGGCGTGAAAGTTTCTATCAGGGGTAAAGTAGACGAAGAGATGGTTGAAAACGTCCGGGTGATCGACTGGAACGAGCCTTCAAATAACGACTTCTTTCTTGCGTCGCAGTTCTGGATCTCAGGTGAGATGTATAAGCGCCGCGCAGACCTTGTAGGCTTTGTCAACGGACTGCCGCTCATCTTCATCGAGCTCAAAGCCTCGCACAGGCGCCTTGAACATGCATACAGGGATAACCTGCGCGACTACAGGAGTGCAATACCGCAGATCTTCTGGTATAACGGCTTCATTATCCTTTCGAACGGCAGCCAGAGCAAAATTGGCAGCATGACCGCTGAGTGGGAACACTTTGCAGAGTGGAAAAAGATCAACAATGAAGGCGAGGAAGGTATCGTATCGCTGGATACAATGATCAGGGGAACATGCGAGCCTGCGCGCCTTCTTGATATTGTCGAGAATTTCACGCTGTTCAGCGAAGCAAGCGGCGGGATTATGAAGCTGGTTGCGAAGAACCACCAGTACCTTGGTGTGAACAATGCTGCTGAGGCATTGAAGCAGATCGAAAAGAATAGAGGCCGCCTCGGAGTTTTCTGGCACACGCAGGGAAGCGGGAAGAGCTACTCCATGGTCTTTTTCTCCCAGAAAGTGCTTCGAAAAATTCCAGGCAATTTCACGTTCGTTATCGTGACCGACAGGCAGGATCTCGACAACCAGATCTACAAAAACTTTGCAGGCGCAGGCGCCGTGACCGAGGAGCAGGTGCAGGCAGAGAGCGGAGAACACTTGAAGCAGCTGCTTCGTGAAGATCACCGCTACATCTTCACTCTTATCCAGAAATTTCACAAAAAGAAGGGCGAGACCTATCCCATGCTTTCAGCCCGCAGGGATATCATCGTAATCACGGACGAGGCGCACCGCAGCCAGTACGATGCCCTTGCCCTGAACATGCGCAATGCCCTCCCAAATGCAGCATTCATCGCCTTCACAGGCACTCCTCTCATTGTGGGTGAAGAAAAGACAAAAGAGGTTTTCGGAGACTATGTCAGCATCTACAACTTCAAGCAGTCAGTGGACGATGGCGCCACGGTTCCGCTTTATTATGAAAATCGCATCCCTGAGCTTCAACTCACTAATAAGGAACTGAATGAAGACCTGCAGCGCCTCATCGATGAGGCTGAACTGGATCCAGACCAGGAGAATAAACTTGAGCGCGAGTTCGCTCGTGAGTACCACCTGATAACAAGGGATGACAGGCTGGAGAAGATAGCCAGGGACATTGTCGCTCATTTCATGGGACGCGGACAATTCGGGAAAGCAATGGTGGTCTCCATTGACAAAGCAACTGCTGTTCGGATGCACGATAAGGTGCAGAAGTACTGGGAAATGTACCTGAAGGATCTACAGGCTGAACTGGCAAAAAGCAAAGAATCCGGGAAAGAGGAACTTGAAAAGAAGATCAAATTCATGGAAGAGACCGACATGGCGGTCGTGGTATCCCAGTCGCAAAATGAGATTGAAGACTTTAAGAAAAAGGGACTGGATATCGCTGCTCATCGCAGGAGGATGGTAAAAGAGGACCTTGACAAGATGTTCAAGGATCCTGATGACCCGTTCCGCATTGTATTCGTGTGCGCCATGTGGATGACAGGCTTTGATGTGCCAGCCTGTTCCACCATCTACCTTGACAAACCCATGCGAAACCACACGCTTATGCAGACCATAGCAAGGGCAAACCGGGTGTTCAGGGAAAAATTGAACGGTCTCGTGGTGGATTATGTTGGAGTGTTCAGGAACCTGCAGAAGGCACTGGCGATCTACGGCTCTGGAGGGGGAATAAAAGAAGGTGAAAAGCCGGTAAACGACAAGAGTGTTCTCGTTGAACAG
PROTEIN sequence
Length: 725
MSDYSEDSLVEQPAIELFSQLGWQNANCFYEKFGENGTLGRETSSEVVLLPRLRAALMRLNPDLPSEAIALAIEELTCDRSVMSPANANREVYRLLKNGVKVSIRGKVDEEMVENVRVIDWNEPSNNDFFLASQFWISGEMYKRRADLVGFVNGLPLIFIELKASHRRLEHAYRDNLRDYRSAIPQIFWYNGFIILSNGSQSKIGSMTAEWEHFAEWKKINNEGEEGIVSLDTMIRGTCEPARLLDIVENFTLFSEASGGIMKLVAKNHQYLGVNNAAEALKQIEKNRGRLGVFWHTQGSGKSYSMVFFSQKVLRKIPGNFTFVIVTDRQDLDNQIYKNFAGAGAVTEEQVQAESGEHLKQLLREDHRYIFTLIQKFHKKKGETYPMLSARRDIIVITDEAHRSQYDALALNMRNALPNAAFIAFTGTPLIVGEEKTKEVFGDYVSIYNFKQSVDDGATVPLYYENRIPELQLTNKELNEDLQRLIDEAELDPDQENKLEREFAREYHLITRDDRLEKIARDIVAHFMGRGQFGKAMVVSIDKATAVRMHDKVQKYWEMYLKDLQAELAKSKESGKEELEKKIKFMEETDMAVVVSQSQNEIEDFKKKGLDIAAHRRRMVKEDLDKMFKDPDDPFRIVFVCAMWMTGFDVPACSTIYLDKPMRNHTLMQTIARANRVFREKLNGLVVDYVGVFRNLQKALAIYGSGGGIKEGEKPVNDKSVLVEQ