ggKbase home page

SR-VP_26_10_2019_C_40cm_scaffold_1941_20

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: 20263..21153

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDK3_METIK similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 267.0
  • Bit_score: 173
  • Evalue 1.90e-40
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:KCZ71368.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 291.0
  • Bit_score: 381
  • Evalue 6.40e-103
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 267.0
  • Bit_score: 173
  • Evalue 5.40e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 891
ATGAATACAAAAATTGGCATAAACTCTCCTCAGATAAAAGATTTTGGAGGAGCAATAGATCCATGTGAAGTGGATATCATTGAACTTGGTCTTGATAGAATGGATTTTTTAGACGAACAAAAAGAGAAGGAACTATTGTCTAAAACTGCCTATCTTGCCTCATCTTTTGGCACTGAATTCACTATCCATGCCCCACACATTGACTCCAGGATTGAAAGATTAAAGATCGATTTTTCAACCAATAATGAAAAAATTTTTACTGTTATGGAGAAGGTCTTCATAATCGCCGCAGAAATAGGAGCAGAATATATAGTTGTTCATCCAGGCAGTCAGAATGGCGGAAGAAAATGTCTTAACTTGAATATTCTTAATTTAATACATATATGTGGTCTTGCCGAAGAATACGGCGTCATCCTCCTTTTGGAGAACCTGTTTGACAGGAACGGTGGAAATAAAGTTGGTGTGTTTCCTGGAGAAATTTTCCATATGATTGAAATGGTAGATTCGGAGCATTTAAAGATAAATCTGGATATCGGTCATGCGTTTATTGCCTCCAATGCTTATGGATTATCCCTGGAAGATTATTTTGAATTAGGTGGCTACATACATCAAATGCATCTTCATGATAACTTTGGCATTCTGGAGTCTGAAGAAGCAATGTTTGGAGACCGCCACCTTCCACTAGGGCTTGGAAAAATAAATTTCAGGGAAGTTTTCAAAAACATATTAAAGACAAATGCAAGAAATTTAATCTTGGAAATTAAGAACTCACCGAGAGAATATACCCTCACAAGCCTTACACAAATCAGAGAATTTTGCAGTTTAAGGTTTGGTTTAAAGCCCCCTGCAATTACGTATTCTATTGAACCTGCTATCGCATGCATTCAATAA
PROTEIN sequence
Length: 297
MNTKIGINSPQIKDFGGAIDPCEVDIIELGLDRMDFLDEQKEKELLSKTAYLASSFGTEFTIHAPHIDSRIERLKIDFSTNNEKIFTVMEKVFIIAAEIGAEYIVVHPGSQNGGRKCLNLNILNLIHICGLAEEYGVILLLENLFDRNGGNKVGVFPGEIFHMIEMVDSEHLKINLDIGHAFIASNAYGLSLEDYFELGGYIHQMHLHDNFGILESEEAMFGDRHLPLGLGKINFREVFKNILKTNARNLILEIKNSPREYTLTSLTQIREFCSLRFGLKPPAITYSIEPAIACIQ*