ggKbase home page

rifcsphigho2_12_scaffold_4339_12

Organism: RIFCSPHIGHO2_12_FULL_Steel_Borg_32_12

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(5734..7503)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 569.0
  • Bit_score: 759
  • Evalue 3.90e-216
ATP-dependent DNA ligase (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 584.0
  • Bit_score: 598
  • Evalue 2.30e-168
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00037F44E5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 592.0
  • Bit_score: 619
  • Evalue 2.60e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1770
ATGATGAGATATGCTGAACTTGTCAGTTCATATGAAATGATCGAGTCAACATCAAGTCGTATATCTATGACATATTATTTGGTCGACCTATTTAGGAAGACTTCTGATGAAGATATAGATAAGGTTATATATCTAACGGAAGGAAAATTATATCCTGCATTTGTAGGAATAGAATTGGGTATGGCAGAAAAAATGGCTCTCAGAGCATTGTCGTCGGCTACAGGAATGTCTCAAGATAAAGTAGAGAATGAATATAAAAAGAAAGGAGATATGGGCATAATTTCAGAAAATTTACTGAATATAATTAAGCAGCCCACTTTATTTAAGAGAGATTTGGATGTCAAAGATGTATATGAAGGTCTTGATAAGATTGCAAGGACAAGTGGTTCCGGAAGTGCTGATACAAAAATAAGGATTCTCTCAGGATTGCTTACAGATGCCAGTCCTAAAGAAGCAAAATATATAATGAGAATGATCACGGGAAAAATGAGATTGGGTATAGCAGATATGACTATTATAGATGCCTTATCTCAAGCATTTGCAAACGGAAGAAAAGAAGAAGTAGAAAGAATATACAATATGACATCTGACTTAGGAGATATTGCAAAGGCATTAAGAAAGAGTGGGATGGAAGGTGTTAAGGAATATCGTGCCAGAGTAGGAAGACCTATCAGAATGATGTTGGCACAGAGATTGAACAGTGTCAAAGAAATAGTGGAAAAGACAGGAATGGCTATATGTGAGTATAAATATGATGGAGAAAGGGTGCAGATACATAAAAATGGAGGAAAGGTAGAATTATTTTCCAGAAATCTTGAGAATATAACGGGGCAATATCCTGACATAGTAAGGATGGTTTTGAATAATATAAAAGTGGGAGAGGCTATAGTAGAAGGGGAATGTGTGGCAGTAGATAGCGCTACAGGATATATGCTCCCATTTCAAGAGCTGATGAAACGTAGAAGAAAATATGGAATTGAAGAAAAGGCAGAAGAGTTTCCTGTAAATATGTATCTTTTTGATGCATTATTGATTGATGGTGAAGATATAACCAATTTTCCTTTGATTAAGAGAAGAAATATATTAAAAAATTCTGTGGTTGAGGGGAATGGGTTGAAATTATCACATGCTACAATGTCAAAAGATAGTGTTGAAATTGAAAAATTTTTCGAGGAGGCAATAGAAAATGGTGGGGAAGGATTAATATTGAAAGATGAAAGAGGGACATATCAGGCTGGTGCAAGAGGATGGTCATGGATTAAGCTCAAAAGATCATATCAGGCAAAGATGGTAGAACCGATAGATGTCGTTATAGTGGGAGCATTTATGGGAAGAGGTAGAAGATCAGGAAATTATGGGGCTTTATTGGTAGCTGTATATGATCGAGGGAGGGATATGTTTGCGACGGTAAGTAAGGTGGGAAGTGGATTTACAGATCAAGAATTAGCAGAGATACCTGGGATGTTAGATGAATATAAGTTGGAAAGGAGGGATGTAAGGGTTGATAGTATTATTGAAGCTGATGTATGGTTTGTTCCGAAAATTGTTATGGAGGTTATTGGAGATGAACTTACATTAAGTCCTATTCATCCATGTGGACTTGGTAAAATAAGAGAGAATGCAGGAATTGCAATTAGATTTCCTAGATTTATGCATAATTGGAGATATGATAAAGGAGCAGAAGATGCGACAAGTGTGGCAGAGATTATTGATATGTATAAATCTCAGCTTAAGAAGATTGAATCTGGTGTACCTATTGGTACTACATAA
PROTEIN sequence
Length: 590
MMRYAELVSSYEMIESTSSRISMTYYLVDLFRKTSDEDIDKVIYLTEGKLYPAFVGIELGMAEKMALRALSSATGMSQDKVENEYKKKGDMGIISENLLNIIKQPTLFKRDLDVKDVYEGLDKIARTSGSGSADTKIRILSGLLTDASPKEAKYIMRMITGKMRLGIADMTIIDALSQAFANGRKEEVERIYNMTSDLGDIAKALRKSGMEGVKEYRARVGRPIRMMLAQRLNSVKEIVEKTGMAICEYKYDGERVQIHKNGGKVELFSRNLENITGQYPDIVRMVLNNIKVGEAIVEGECVAVDSATGYMLPFQELMKRRRKYGIEEKAEEFPVNMYLFDALLIDGEDITNFPLIKRRNILKNSVVEGNGLKLSHATMSKDSVEIEKFFEEAIENGGEGLILKDERGTYQAGARGWSWIKLKRSYQAKMVEPIDVVIVGAFMGRGRRSGNYGALLVAVYDRGRDMFATVSKVGSGFTDQELAEIPGMLDEYKLERRDVRVDSIIEADVWFVPKIVMEVIGDELTLSPIHPCGLGKIRENAGIAIRFPRFMHNWRYDKGAEDATSVAEIIDMYKSQLKKIESGVPIGTT*