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BSR_Ace_UAPBR_effluent_at_32316_5

Organism: BSR_Ace_UAPBR_effluent_at_Phycisphaerae_63_30

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 ASCG 11 / 38
Location: comp(5807..6475)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDW1_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 181.0
  • Bit_score: 57
  • Evalue 1.50e-05
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EZP70603.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 165.0
  • Bit_score: 59
  • Evalue 4.20e-06
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 181.0
  • Bit_score: 57
  • Evalue 4.20e-06

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGATTTTCCCATCCACATCTGTGCCGCGAGAGACGCCAAGTATATGTATCAATCGAGATAGCGTTTTCTTCCGTGAAGCAGATGACGGGTGGGGATGCATGGTGGCGAGACAAGTCTTGTCAGATCGTAGCGAAAGAGCGGAAGGAGCGAGAATACCGACGCAGGACTGGGAGATGCTTTATCGGAAGCATTCTGTGAAGCTGCGGCGCTATTTCGTCTCCAGAGGAACCACCTTCGTCGATGCGCAAGACTTGGTCCACGAAGTGTTTCATGAACTCGGGCGAGTCAGAATCCCGGACGACCCACATACATATGTCTACGGTATCGCCAGGAATGTCCTTTCTAAGTATTATCGACGTCTATCAGGAGAACGTGCGGGCTTCGTTGAATATTGCCGGCATGCGGCAACCGGAAATGAGCATTCGCCCGACGGTGCGAGCAGCATGGGCGCGTTGGAAGGGCATACGATCGAAGAGGTCGAACGAATCCTAAGGGATGCAGTTACCAGACTGGCGCCAGCGTATCGAGAACTAGCGATCCTGCGGTTTAGCAGAGGACTGTCCACAAGAGAACTGGCTTCTCTGTCGCACTGCTCTGAAGATGCCATGAGGAAACGTATCCAACGACTGAGAGCTATGTTGCGCGAGAGCATTCGGGAGAGGATATAG
PROTEIN sequence
Length: 223
MIFPSTSVPRETPSICINRDSVFFREADDGWGCMVARQVLSDRSERAEGARIPTQDWEMLYRKHSVKLRRYFVSRGTTFVDAQDLVHEVFHELGRVRIPDDPHTYVYGIARNVLSKYYRRLSGERAGFVEYCRHAATGNEHSPDGASSMGALEGHTIEEVERILRDAVTRLAPAYRELAILRFSRGLSTRELASLSHCSEDAMRKRIQRLRAMLRESIRERI*