ggKbase home page

BSR_Ace_UAPBR_effluent_p_88128_1

Organism: BSR_Ace_UAPBR_effluent_p_Hydrogenophilales_68_7

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 4
Location: comp(3..677)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12497621 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 225.0
  • Bit_score: 432
  • Evalue 2.30e-118
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 225.0
  • Bit_score: 421
  • Evalue 8.60e-116
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 225.0
  • Bit_score: 421
  • Evalue 4.30e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGGCTGGCAAAAAGTCGTCGCAAGACGAGCAGATCACCAAATACGCGCCGCTGGTCAAGCGCATCGCTTATCACATGATGGCGCGCCTGCCCGCCAGCGTGGAAGTCGACGACCTGATCCAGGTCGGCCTCATAGGCCTGATGGACGCGGTGTCGCGCTTCGACGGCAGTCAGGGCGCGCAGTTCGAGTCCTACGCCACGCAGCGCATCCGCGGCGCCATGCTCGACGAACTGCGCGAGGCCGACTGGCTGCCGCGCCACGTGCGGCAGAAGTCGCGCCAGATCGAGACCGCCATCCACAAGCTGGAACAGCGCAACGGCCGGGCGCCGAGCGAGCAGGAAATTTCGGCCGAACTCGGCATGCCCATCGATCAGTACCAGTCCATGCTGGGCGACGTGAAGTGCTCGCAGTTGCTGTACTACGAGGATTTTTCCGACGAGGACAGCGCGAGCTTTCTCGAACGCTACCTGGTCGACGGCGCGAGCGACCCGCTCGCCGTGCTGGAAGATGGCGGTTTCCGCGACAGCCTGATCGCCGCGATCCATCATCTGCCGGAACGCGAGCGCAGCATGATGGGCATGTACTACGAGCAGGACATGAACCTGAAGGAAATCGGCGCCGTGCTCGGCGTGTCCGAGTCGCGCGTCTGCCAGTTGCATTCGCAGGCGGTGGCC
PROTEIN sequence
Length: 225
MAGKKSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVSRFDGSQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIETAIHKLEQRNGRAPSEQEISAELGMPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGASDPLAVLEDGGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVA