ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

BSR_Ace_UAPBR_effluent_p_170971_2

Organism: BSR_Ace_UAPBR_effluent_p_Clostridiales_54_14

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 15 / 38
Location: comp(301..1446)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZA7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 387.0
  • Bit_score: 357
  • Evalue 1.60e-95
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJF38480.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 387.0
  • Bit_score: 357
  • Evalue 2.20e-95
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 384.0
  • Bit_score: 349
  • Evalue 9.20e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAGCAAGCGAGGAGAAAATATTTACAAGAGAAAGGATGGCCGTTGGGAAGGTCGCGTATTGAAACCCCAGGGAGGTTATGCCTATGTATACGGTAAGAGTTATCGTGAGGTAAAAGAAAGGAAAACACTTTTTTTGCAGAATAAGGAGCAAGATTTCTCAAGTGAAGAAGAAAATCTTTTAGCTAGTGAACAGTTTAAACAGTGGATACATAAACAAGAAATTCATGTTAGAAGATCTACTTATGCCAGCTATGAATCCTGTGTTTCAAATTATATTCTGCCGTTCTTTTATTCTGACATTGATTGCTTGTCTGAATTTCAAATCAACAAGTTTGTGCACACGATTGCACAGCGTGAAAATCTCTCAGTCGCTTACCGCAAAAAGATTATTTGCATTTTTAAAACAGCAATCAACAGTATGGTAAAAGAAAATAAACGGCCACCAATGCCGTATGTCCAAGTGAAAATACAGGATAAAAAATTAGAAACGATACCGTTTTTTTCGCAGGAGGAACAAAAAAGCATCGAAAAAAGTATATTTAAACTTGACGATTTCAGAGTGCTTGGTATTTTGTTGTGTTTTTATACTGGTATTCGCTTAGGCGAACTTTGTGCGTTGCGTTGGAAAAATATCGATTTTGAAAGTGGAGTGATGGTGATTGCCGCAACGACGATGCGCACTAACAAGCAACAAAAAGGTGCAGCAAAGACGGGTTTGATCACATCACCACCCAAAACTAAAAATTCAATACGCGCAATCCCGGTGCCCGCCTTTATGCTAAAAAAACTGCAAGAAAATCAACCAGATAAGGCAGAGCAGAACTGTTATATCTTCTCCGGTACAACTTATCCGGTAGATCCCCGGACAATGCAACGCATTTTTCACAAGGTTTTAAAAAACGCAGGAGTATCGCCCCGTAAATATCATGCAATCCGGCATACATTTGCCACTCGTGCGTTAGAATTGGGGGTAGACATAAAAACGTTGAGCGAGCTTTTGGGTCACTCAAGCGTTACGATCACCTTAAATATTTATGCACATTCCATGCTGGAACAGAAAAAAATCGCAATCGAAAAAATGAATTCATTGTATCTCTCCCACGGCACTACCGGCTTTCGCGCCGTCGATTCTGCCGTCAGCTAA
PROTEIN sequence
Length: 382
MSKRGENIYKRKDGRWEGRVLKPQGGYAYVYGKSYREVKERKTLFLQNKEQDFSSEEENLLASEQFKQWIHKQEIHVRRSTYASYESCVSNYILPFFYSDIDCLSEFQINKFVHTIAQRENLSVAYRKKIICIFKTAINSMVKENKRPPMPYVQVKIQDKKLETIPFFSQEEQKSIEKSIFKLDDFRVLGILLCFYTGIRLGELCALRWKNIDFESGVMVIAATTMRTNKQQKGAAKTGLITSPPKTKNSIRAIPVPAFMLKKLQENQPDKAEQNCYIFSGTTYPVDPRTMQRIFHKVLKNAGVSPRKYHAIRHTFATRALELGVDIKTLSELLGHSSVTITLNIYAHSMLEQKKIAIEKMNSLYLSHGTTGFRAVDSAVS*