ggKbase home page

BSR_Ace_UAPBR_inlet_p_159820_7

Organism: BSR_Ace_UAPBR_inlet_p_Leucobacter_sp__UCD_THU_71_10

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5225..5824)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629D46 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 195.0
  • Bit_score: 325
  • Evalue 2.60e-86
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KDA05911.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 255
  • Evalue 4.70e-65
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 196.0
  • Bit_score: 238
  • Evalue 9.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCTGGACACGATGGTCATCGACGGAATCGAGATGGCGGACGACGGCTCGGGGGCCGATCCCGCGGACGAGGCGCTGGCGCGCGCCGCCCACGGCGATCAGCGCGCCTTCGCCGGGCTCTACGATCTGCTCTCCGCTCGGGTGTTCGGCCTGATCCTCCGTGTACTGGTCGACCGCTCCCAGAGCGAGGAGGTGCTGCAGGAGGTCTTCCTCGAGGCCTGGCAGTCCGCGGCCTCGTTCGATCCGGATCGTGGCAGCGCTCGCACGTGGCTCCTCACCATCGCGCATCGCCGGGCCGTCGATCGGGTGCGCGCCTCTCAGGCCGCGCGGCGCAGGGATCTCGCAGCCGGGGCGAGGGACCTGGCTCAGGCGCAGCCCGGCGTCGAGGATGAGGTGGAGCTCCTGATCGAGGGGACCCGGGCGGTGCGGGGGCTCGACGGGCTCCCCGAACCCCAGCGCCGCGCCATCGTGCTCGCCTACTTCGGCGGGTACAGCCAGAGCGAGATCTCGGTGCTGCTCGGAACCCCGCTCGGCACCGTCAAGACACGCATCCGAGATGGATTGACCCGGCTCAGGAACGAAATGGAGGCGACGCGATGA
PROTEIN sequence
Length: 200
MLDTMVIDGIEMADDGSGADPADEALARAAHGDQRAFAGLYDLLSARVFGLILRVLVDRSQSEEVLQEVFLEAWQSAASFDPDRGSARTWLLTIAHRRAVDRVRASQAARRRDLAAGARDLAQAQPGVEDEVELLIEGTRAVRGLDGLPEPQRRAIVLAYFGGYSQSEISVLLGTPLGTVKTRIRDGLTRLRNEMEATR*