ggKbase home page

BSR_Ace_UAPBR_inlet_p_67546_3

Organism: BSR_Ace_UAPBR_inlet_p_Clostridiales_37_6

near complete RP 37 / 55 BSCG 44 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 1699..2268

Top 3 Functional Annotations

Value Algorithm Source
Specialized sigma subunit of RNA polymerase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQP7_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 180.0
  • Bit_score: 260
  • Evalue 7.50e-67
specialized sigma subunit of RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 190.0
  • Bit_score: 260
  • Evalue 2.80e-67
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KIL07527.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 190.0
  • Bit_score: 260
  • Evalue 1.10e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
ATGATGGCGTCCTTTAATATTAAAACAAGTGAGATGGAAAATGACTCAAGAGAGCAATTGCTTGAGGCCTTTACCCAGATATATGAAGCTTATTATAAGCGTGTATTTAAATATATTTGCTACCGGATTGATGATCAATCCATGGCAGAAGAAATTTGTAGTCAAATCTTTGAGAGGATTATGATAAAATATCCTAGCTTTTCGGGGAATGACAAAAGTTTTGAAAGCTGGCTTTTTACCATTGCCAAAAATACATTGAATGATTATTACCGCAAGAAACAAAGGATTTTTCATTTCCCTCTGGATTATATTATGGATAAAATAGCGCCAAAGTCTTCTCCAGATGAATACATTCTCACTGAAGAAAATAATGCCTATTTATTACAAGCTCTAAAACATTTAAATGAAAGAGAACGTGCTCTTGTTTCTTTAAAATATGGTGCTGAACTTAAAAATACAGAGATTGCGCAATTAATGGATTTAAGCGAATCCAATGTAAGTGTTATCCTGTGCCGCAGTTTAAAAAAACTGAAAAAAATTCTAGTCAGTGGAGGCTTTAGATATGAATAG
PROTEIN sequence
Length: 190
MMASFNIKTSEMENDSREQLLEAFTQIYEAYYKRVFKYICYRIDDQSMAEEICSQIFERIMIKYPSFSGNDKSFESWLFTIAKNTLNDYYRKKQRIFHFPLDYIMDKIAPKSSPDEYILTEENNAYLLQALKHLNERERALVSLKYGAELKNTEIAQLMDLSESNVSVILCRSLKKLKKILVSGGFRYE*