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BSR_Lac_UAPBR_inlet_p_34015_2

Organism: BSR_Lac_UAPBR_inlet_p_Ochrobactrum_anthropi_56_5

near complete RP 41 / 55 MC: 5 BSCG 43 / 51 MC: 8 ASCG 14 / 38 MC: 6
Location: 380..1123

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Myroides RepID=K1HNU9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 248.0
  • Bit_score: 488
  • Evalue 2.20e-135
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ41087.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 248.0
  • Bit_score: 488
  • Evalue 3.10e-135
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 248.0
  • Bit_score: 306
  • Evalue 5.80e-81

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Taxonomy

Myroides odoratus → Myroides → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 744
TTGGATTATTCAACAAAAGTGCAGGAAGTAATTCCGAATCTGTTTCGAGAACAATATGCAAAGATGACGGCTGTACTATGCCGTCATTTTGGCTTAGCGCATATTGAACTAGCCGAAGATATTGTGAGTGATACTTTTTTAAAAGCAACGGAACGATGGACTATAGAGGGGATACCCCAATATCCAGAAGCTTGGTTGTATACCGTTGCCAAAAACAAAACCAAAGATTACATTAAGCATCAGGCAGTGTTTGATCAAAAAGTGAAAAGCGAAATTAGCCCACACACAGACCAAGAGGATTTGCCGATTGAACTAGATTCGACGGTTAGTACGGATAGTCAACTGGCGATGATTTTTGCTATTTGTGATCCCATTATCCCAGCGGAAGGGCAACTTTGTTTAGCACTGCAAATTCTATGCGGATTTAGTATAGATGAAATTTCCAATGCACTATTAACTAAAAAAGAAACGATTAAGAAGCGACTGTTCAGGGCAAAAGAACAGTTAAGAGCCAGTAATTTTGAGATTCAAGCACTCTTGCCCACTCAAATTAACCAGCGATTGCCACAGGTTCATAAAACCTTATACCTCTTTTTTAATGAGGGTTATTTTTCTACCAATCACAATCAAGTGATTCGAAAAGAGTTGTGTTATGAAGCCCTCCGATTAACGGTTATGCTAACAGCCAACGACAGGACCAATACGGCAGAAACGAACGCTTTGCTTGCGTTATTTTGCTATCAA
PROTEIN sequence
Length: 248
LDYSTKVQEVIPNLFREQYAKMTAVLCRHFGLAHIELAEDIVSDTFLKATERWTIEGIPQYPEAWLYTVAKNKTKDYIKHQAVFDQKVKSEISPHTDQEDLPIELDSTVSTDSQLAMIFAICDPIIPAEGQLCLALQILCGFSIDEISNALLTKKETIKKRLFRAKEQLRASNFEIQALLPTQINQRLPQVHKTLYLFFNEGYFSTNHNQVIRKELCYEALRLTVMLTANDRTNTAETNALLALFCYQ