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BSR_Lac_UAPBR_inlet_p_1_19710_1

Organism: BSR_Lac_UAPBR_inlet_p_1_Firmicutes_40_18

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 3..644

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R698_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 147.0
  • Bit_score: 166
  • Evalue 2.80e-38
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 147.0
  • Bit_score: 166
  • Evalue 8.10e-39
Tax=BJP_IG2102_Clostridiales_34_350 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 149.0
  • Bit_score: 176
  • Evalue 2.30e-41

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Taxonomy

BJP_IG2102_Clostridiales_34_350 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 642
GGTTTTTTTATACCCATTTTTCATAATACGGCTGTAAGAGAGCCGAGAGTGACAGAAATGTTATTCTCGGCTTTTTTTGTGCCCATTGTTAGGAGGAAAAATGGAAAAGACCAATCGTTTGTTCCGGTGTCGTTCTCCACCTTTCTGATTTTGATTTCATGCATTTCAAAATTTAGAAATGGAGGGAAACGAATGGCGGCAAATAAAAGGATACCAAATTATAAAAAGATGTATCCAAGTGCAAATGACGAAGTTATAAATGTTTTAAAACAAGGGGCAAGGAAAGCTATTTACCAAGAGTATGACTTAAAGTGTGAAACTTTCATAGTAGATGAAGCCCAGGAAAAAGTTTATTTTGTTCCAAGCAGAGAGGATTCATTAGAGCGTTTAATGGAATCGGGGGTACAATTCTGTGATGAAGAAATCCATGTGGAAGAACTCGTAATCAAAGAAGTTTTAATCGAGGAACTTCTTTTAAGCTTAAAATTTCTTACACTGGAAGAGCTGGAGCTGATAAATGCTCTTTTTTATGAGGGTAAAAGTGAACGTGAATACGCAGAACGGTTAGGGGTTTATCACAATGCGATACATAAGAGAAAGAAAAGAATTATAAAAAAGCTAAAATATTTAATGACAAAATGA
PROTEIN sequence
Length: 214
GFFIPIFHNTAVREPRVTEMLFSAFFVPIVRRKNGKDQSFVPVSFSTFLILISCISKFRNGGKRMAANKRIPNYKKMYPSANDEVINVLKQGARKAIYQEYDLKCETFIVDEAQEKVYFVPSREDSLERLMESGVQFCDEEIHVEELVIKEVLIEELLLSLKFLTLEELELINALFYEGKSEREYAERLGVYHNAIHKRKKRIIKKLKYLMTK*