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BSR_inoc_82608_4

Organism: BSR_inoc_Pseudomonas_aeruginosa_67_10

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3540..4037)

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma factor SigX n=108 Tax=Pseudomonas RepID=B7VBA3_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 165.0
  • Bit_score: 333
  • Evalue 8.00e-89
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 165.0
  • Bit_score: 333
  • Evalue 2.30e-89
RNA polymerase sigma factor SigX {ECO:0000313|EMBL:ETU77665.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 165.0
  • Bit_score: 333
  • Evalue 1.10e-88

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGACGCGCGCCTATGAAGAATTGATGCGGCGTTACCAGCGCACGCTGTTCAACGTCTGTGCCCGCTACCTGGGCAACGACCGCGACGCGGACGACGTGTGCCAGGAGGTGATGCTGAAAGTTTTGTACGGGTTGAAGAACTTTGAGGGCAAGTCGAAGTTCAAAACGTGGCTATATAGCATCACGTACAACGAGTGCATCACGCAGTACCGCAAGGAGCGCCGCAAGCGCCGATTGATGGATGCGCTCAGCCTCGACCCGCTGGAGGAGGCTTCCGAGGAGAAGTCGCCGAAGGTTGAGGAGCGGGGCGGATTGGATCGTTGGCTCGTCCATGTCAATCCGATAGATCGGGAGATTCTGGTTCTTCGCTTCGTCGCGGAACTGGAGTTTCAGGAGATAGCGGATATCATGCACATGGGTCTGAGTGCGACGAAAATGCGCTACAAGCGGGCACTGGACCGCCTGCGCGAAAAGTTTTCAGATGCGACCGAAACATAG
PROTEIN sequence
Length: 166
VTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEEKSPKVEERGGLDRWLVHVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDRLREKFSDATET*