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BSR_inoc_171350_29

Organism: BSR_inoc_Pseudomonas_aeruginosa_67_10

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(31148..31666)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Pseudomonas aeruginosa RepID=U8Q460_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 341
  • Evalue 4.00e-91
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 339
  • Evalue 3.30e-91
RNA polymerase sigma factor {ECO:0000313|EMBL:CKG76360.1}; RNA polymerase sigma-70 factor {ECO:0000313|EMBL:BAR65348.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 339
  • Evalue 1.60e-90

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGTCGGCGGGTGACGTCAGCAACAGCGAATTCGTGGGTAGCCTGTACCGGGACCACCGCAGCTGGCTGCTTGCCTGGCTGAACCGCAACCTCGGCTGCCGCCAGCGCGCCGAAGACCTCAGCCAGGACACCTTCGTTCGCCTCCTCGGCCGCCCGGAGCTGCCCGGCCTGCGCGAACCGCGCGCGTTCCTGGCGAAGGTGGCGCGCGGTCTGATGATCGACCACTTCCGCCGCGCCGCCCTTGAGCAGGCCTATCTCGCCGAACTGGCGCTGGTTCCGGAAGCGGAGCAGCCTTCGGCCGAAGAGCAGTACCTGATTCTCGAGGACCTCCGCGAGATCGATCGCCTGCTTGGCACGCTGTCGCTGAAGGCGCGTAGCGCGTTTCTCTATAGCCGCCTGGACGGCATGCCCCACGCGGAGATCGCCGAGCGTCTCGGAGTCTCGGTGCCGCGCGTGCGCCAATACCTGGCCCAGGGTCTGCGCCAGTGCTACATCGCCCTCTACGGAGAGCCCCGGTGA
PROTEIN sequence
Length: 173
VSAGDVSNSEFVGSLYRDHRSWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR*