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BSR_inoc_55701

Search features with annotation key words

Displaying items 31-60 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_55701_31
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35969..37114)
DNA (1146bp) protein (382aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG1_9FIRM
ABC transporter permease
Tax=BJP_IG2157_Clostridiales_52_13
BSR_inoc_55701_32
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37111..38652)
DNA (1542bp) protein (514aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSH0_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX43622.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
BSR_inoc_55701_33
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(38741..39841)
DNA (1101bp) protein (367aa)
Basic membrane lipoprotein id=3843647 bin=GWF2_Firmicute_51_9 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
membrane lipoprotein TmpC
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_55701_34
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(39972..40310)
DNA (339bp) protein (113aa)
Ribosome-binding factor A n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G3F7_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ribosome-binding factor A
BSR_inoc_55701_35
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(40312..42609)
DNA (2298bp) protein (766aa)
Translation initiation factor IF-2 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4Q0_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
infB; Translation initiation factor IF-2
BSR_inoc_55701_36
Enterococcus haemoperoxidus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(42614..42910)
DNA (297bp) protein (99aa)
50S ribosomal protein L7A n=1 Tax=Enterococcus haemoperoxidus ATCC BAA-382 RepID=R2QW70_9ENTE
50S ribosomal protein L7A {ECO:0000313|EMBL:EOH99633.1}; TaxID=1158608 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus haemoperoxidus ATCC BAA-382.;"
ribosomal protein L7A family protein
BSR_inoc_55701_37
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(42907..43176)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XRY9_9BACL
Nucleic-acid-binding protein {ECO:0000313|EMBL:GAE36070.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
hypothetical protein
BSR_inoc_55701_38
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(43186..44271)
DNA (1086bp) protein (362aa)
NusA n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FRC8_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
NusA antitermination factor
BSR_inoc_55701_39
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(44281..44745)
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G3F2_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
BSR_inoc_55701_40
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(44861..45724)
DNA (864bp) protein (288aa)
DMT(Drug/metabolite transporter) superfamily permease id=4682694 bin=GWC2_Tenericute_34_14 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
permeases of the drug/metabolite transporter (DMT) superfamily
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
BSR_inoc_55701_41
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(45734..46291)
DNA (558bp) protein (186aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H0S6_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
Predicted membrane protein
BSR_inoc_55701_42
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(46382..47050)
DNA (669bp) protein (223aa)
ung; uracil-DNA-glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Uracil-DNA glycosylase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXP1_CLOSD
BSR_inoc_55701_43
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(47053..47796)
DNA (744bp) protein (248aa)
RNA methyltransferase, TrmH family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYZ6_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDS76037.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rRNA methylase
BSR_inoc_55701_44
unknown

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comp(47793..48389)
DNA (597bp) protein (199aa)

This feature has no annotations

BSR_inoc_55701_45
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(48400..49617)
DNA (1218bp) protein (406aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Probable tRNA sulfurtransferase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G3E6_9FIRM
thiI; thiamine biosynthesis protein ThiI
BSR_inoc_55701_46
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(49610..50731)
DNA (1122bp) protein (374aa)
Cysteine desulfurase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4N7_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:CCY07441.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L-cysteine sulfurtransferase
BSR_inoc_55701_47
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50852..51298
DNA (447bp) protein (149aa)
histidine kinase n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B7982E
Uncharacterized protein {ECO:0000313|EMBL:KGK83270.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
GAF domain-containing protein
BSR_inoc_55701_48
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(51311..53146)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002E6E4AC
Alpha amylase catalytic region {ECO:0000313|EMBL:CCY07843.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
alpha amylase
BSR_inoc_55701_49
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(53148..55553)
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07842.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
glycogen/starch/alpha-glucan phosphorylase
BSR_inoc_55701_50
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(55578..57011)
DNA (1434bp) protein (478aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Glycogen synthase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G5S9_9FIRM
glycogen synthase
BSR_inoc_55701_51
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(57008..58120)
DNA (1113bp) protein (371aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FRX3_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CCY07840.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
BSR_inoc_55701_52
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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comp(58130..59311)
DNA (1182bp) protein (394aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XSV3_9FIRM
glucose-1-phosphate adenylyltransferase
BSR_inoc_55701_53
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(59326..61152)
DNA (1827bp) protein (609aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSI5_9FIRM
BSR_inoc_55701_54
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(61163..62557)
DNA (1395bp) protein (465aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A502_9FIRM
BSR_inoc_55701_55
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(62661..63029)
DNA (369bp) protein (123aa)
50S ribosomal protein L17 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G7K8_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rplQ; 50S ribosomal protein L17
BSR_inoc_55701_56
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(63066..64178)
DNA (1113bp) protein (371aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rpoA; DNA-directed RNA polymerase, subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FTL6_9FIRM
BSR_inoc_55701_57
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(64202..64585)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FXT1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rpsK; 30S ribosomal protein S11
BSR_inoc_55701_58
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(64604..64969)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FUB9_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rpsM; 30S ribosomal protein S13
BSR_inoc_55701_59
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(64985..65098)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Bulleidia extructa W1219 RepID=D2MMC8_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
50S ribosomal protein L36
BSR_inoc_55701_60
Staphylococcus simulans, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(65143..65361)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G7K1_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1405498 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simulans UMC-CNS-990.;"
infA; translation initiation factor IF-1 (infA)
Displaying items 31-60 of 102 in total

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