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BSR_inoc_86724

Search features with annotation key words

Displaying items 61-90 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_86724_61
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63398..64267
DNA (870bp) protein (290aa)
RNA polymerase sigma factor RpoH n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAJ2_9GAMM
RNA polymerase sigma 70
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_62
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64410..65024)
DNA (615bp) protein (205aa)
Microcompartments protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAJ0_9GAMM
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AHF02022.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_63
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65026..65640)
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00035FCD47
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
BSR_inoc_86724_64
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65776..66441
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GQ1_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41672.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_86724_65
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66536..67528)
DNA (993bp) protein (331aa)
Transcriptional regulator, LysR family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAI7_9GAMM
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AHF02025.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_66
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67558..67863)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00035DE81E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02026.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_67
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67874..68857)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAX9_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32312.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_68
unknown

Not on your lists

comp(69070..69264)
DNA (195bp) protein (65aa)

This feature has no annotations

BSR_inoc_86724_69
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69273..69536)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003630734
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32314.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_70
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69533..70078)
DNA (546bp) protein (182aa)
Ferritin Dps family protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAI2_9GAMM
bacterioferritin
Bacterioferritin {ECO:0000313|EMBL:AHF02030.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_71
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70125..70436)
DNA (312bp) protein (104aa)
Microcompartments protein n=2 Tax=Thioalkalimicrobium RepID=F6DAY3_THICA
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AEG32316.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_72
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70526..70834)
DNA (309bp) protein (103aa)
Microcompartments protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAI0_9GAMM
microcompartments protein
Carbon dioxide-concentrating protein CcmK {ECO:0000313|EMBL:AHF02032.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_73
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70975..71229)
DNA (255bp) protein (85aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAH9_9GAMM
carboxysome shell protein
Carboxysome peptide B {ECO:0000313|EMBL:AEG32318.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_74
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71230..71481)
DNA (252bp) protein (84aa)
Carboxysome peptide A n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAY6_THICA
carboxysome shell protein
Carboxysome shell protein {ECO:0000313|EMBL:AHF02034.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_75
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71483..73030)
DNA (1548bp) protein (516aa)
Carboxysome shell peptide n=1 Tax=Hydrogenovibrio marinus RepID=Q75W37_HYDMR
Carboxysome shell peptide {ECO:0000313|EMBL:BAD15315.1}; Carboxysome shell protein CsoS3 {ECO:0000313|EMBL:KDN95904.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
carboxysome shell protein CsoS3
BSR_inoc_86724_76
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73047..75221)
DNA (2175bp) protein (725aa)
Putative carboxysome structural peptide CsoS2 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAY8_THICA
carboxysome structural peptide CsoS2
Putative carboxysome structural peptide CsoS2 {ECO:0000313|EMBL:AEG32321.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_77
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75248..75592)
DNA (345bp) protein (115aa)
ribulose bisphosphate carboxylase small chain n=1 Tax=Thiomicrospira halophila RepID=UPI00036FE65B
ribulose bisphosphate carboxylase small chain
Ribulose bisphosphate carboxylase small chain {ECO:0000313|EMBL:AHF02036.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_86724_78
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75621..77039)
DNA (1419bp) protein (473aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
ribulose bisophosphate carboxylase n=1 Tax=Thiomicrospira halophila RepID=UPI000372755B
BSR_inoc_86724_79
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77393..77764)
DNA (372bp) protein (124aa)
Invasion gene expression up-regulator SirB n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAZ1_THICA
Invasion gene expression up-regulator SirB
Invasion gene expression up-regulator SirB {ECO:0000313|EMBL:AEG32324.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_80
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77764..78708)
DNA (945bp) protein (315aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003636A1F
biotin biosynthesis protein BioC
BSR_inoc_86724_81
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78695..79489)
DNA (795bp) protein (265aa)
Carboxylesterase BioH n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E53_THICR
alpha/beta hydrolase
Carboxylesterase BioH {ECO:0000313|EMBL:ABB42570.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_86724_82
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79701..79910
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=2 Tax=Thioalkalimicrobium RepID=F6DAZ4_THICA
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEG32327.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_83
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80114..80611
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAZ5_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32328.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_84
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80666..81862
DNA (1197bp) protein (399aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
tryptophan synthase subunit alpha n=1 Tax=Thiomicrospira halophila RepID=UPI00037E1677
BSR_inoc_86724_85
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82133..83332)
DNA (1200bp) protein (400aa)
8-amino-7-oxononanoate synthase {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00016811}; Short=AONS {ECO:0000256|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00087543};; 7-keto-8-amino-pelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_01693}; 8-amino-7-ketopelargonate synthase {ECO:0000256|HAMAP-Rule:MF_01693}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
8-amino-7-oxononanoate synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAG8_9GAMM
8-amino-7-oxononanoate synthase
BSR_inoc_86724_86
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83479..84495)
DNA (1017bp) protein (339aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Biotin synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAG7_9GAMM
biotin synthase
BSR_inoc_86724_87
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84557..85234
DNA (678bp) protein (226aa)
Phosphoribosyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAZ8_THICA
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AEG32331.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_86724_88
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85332..86210
DNA (879bp) protein (293aa)
Cation diffusion facilitator family transporter (Probable substrate zinc) n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V9S0_HALED
zitB; cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter (Probable substrate zinc) {ECO:0000313|EMBL:CBV41904.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
BSR_inoc_86724_89
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86210..87373
DNA (1164bp) protein (388aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:AEG32332.1}; EC=2.7.1.31 {ECO:0000313|EMBL:AEG32332.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Glycerate kinase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAZ9_THICA
BSR_inoc_86724_90

Not on your lists

87390..87785
DNA (396bp) protein (132aa)
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BGP5_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47953.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying items 61-90 of 104 in total

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