ggKbase home page

BSR_inoc_148714

Search features with annotation key words

Displaying items 61-90 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_148714_59
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55142..55384
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z563_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIC20470.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein
BSR_inoc_148714_60
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55384..55767
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAP8_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31141.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_148714_61
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55764..56525
DNA (762bp) protein (254aa)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Thiomicrospira arctica RepID=UPI000360BCBE
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=CG_Thiomicrospira_01
BSR_inoc_148714_62
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56525..56812
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9M5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02188.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_63
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56789..56995)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBK6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDH47098.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
integrase catalytic subunit
BSR_inoc_148714_64
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57070..58698
DNA (1629bp) protein (543aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
2-polyprenylphenol 6-hydroxylase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9M4_9GAMM
ubiquinone biosynthesis protein UbiB
BSR_inoc_148714_65
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58740..59240)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IM9_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB40994.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_66
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59230..61386)
DNA (2157bp) protein (719aa)
TonB-dependent receptor n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAP5_THICA
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEG31138.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_148714_67
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61435..61734)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GA8_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41815.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_68
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61786..62928)
DNA (1143bp) protein (381aa)
udg; UDP-glucose/GDP-mannose dehydrogenase family protein (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=2 Tax=Acinetobacter schindleri RepID=N8Y2Y5_9GAMM
WbfV protein {ECO:0000313|EMBL:BAA33612.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
BSR_inoc_148714_69
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62925..64487)
DNA (1563bp) protein (521aa)
Integral membrane protein MviN n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D890_9GAMM
membrane protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_70
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64616..65203)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI0003805348
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT48121.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
BSR_inoc_148714_71
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65263..66423)
DNA (1161bp) protein (387aa)
NnrS family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DK4_THICR
NnrS
Tax=CG_Thiomicrospira_01
BSR_inoc_148714_72
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66627..67067
DNA (441bp) protein (147aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI9_THICR
BadM/Rrf2 family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
BSR_inoc_148714_73
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67069..69993
DNA (2925bp) protein (975aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036BBE4C
hypothetical protein
Tax=CG_Thiomicrospira_01
BSR_inoc_148714_74
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70096..70848
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037A7ABF
CBS domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
BSR_inoc_148714_75
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70904..71215
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBY7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01703.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_76
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71333..72061)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Burkholderia phage phi644-2 RepID=A4JX42_9CAUD
Phage protein {ECO:0000313|EMBL:KGQ20627.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
BSR_inoc_148714_77
unknown

Not on your lists

comp(72049..72231)
DNA (183bp) protein (61aa)

This feature has no annotations

BSR_inoc_148714_78
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72400..73830
DNA (1431bp) protein (477aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
Cytosine-specific methyltransferase n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CJ24_SHEPW
site-specific DNA-methyltransferase
BSR_inoc_148714_79
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(73840..74580)
DNA (741bp) protein (247aa)
Restriction endonuclease, type II, SinI n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U853_9CYAN
Restriction endonuclease, type II, SinI
Restriction endonuclease, type II, SinI {ECO:0000313|EMBL:AFY90778.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
BSR_inoc_148714_80
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(74595..74963)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000345FBB3
Methylase {ECO:0000313|EMBL:KIJ85686.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
methylase
BSR_inoc_148714_81
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(75067..76302)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003818489
hypothetical protein
Tax=CG_Anaero_03
BSR_inoc_148714_82
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76336..76899)
DNA (564bp) protein (188aa)
Transcriptional regulator, ArsR family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D998_9GAMM
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHF00824.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_83
unknown

Not on your lists

comp(76983..77228)
DNA (246bp) protein (82aa)

This feature has no annotations

BSR_inoc_148714_84
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77298..78035)
DNA (738bp) protein (246aa)
Beta-lactamase-like protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D999_9GAMM
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHF00825.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_85
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78173..79417
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8Y6_THICA
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEG31986.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_148714_86
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79722..80630
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9A1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00827.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_87
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80757..81143
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036C5D52
Uncharacterized protein {ECO:0000313|EMBL:KDN94873.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
BSR_inoc_148714_88
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81213..81584
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000377A4B0
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACR14012.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
Displaying items 61-90 of 91 in total

View Taxonomy