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BSR_inoc_29496

Search features with annotation key words

Displaying items 31-60 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_29496_31
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32305..34137)
DNA (1833bp) protein (611aa)
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7A2_9GAMM
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AHF01157.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_32
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34240..35871)
DNA (1632bp) protein (544aa)
Solute:sodium symporter (SSS) family transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GL0_THICR
actP; acetate permease
Acetate permease {ECO:0000313|EMBL:AHK79343.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
BSR_inoc_29496_33
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35868..36176)
DNA (309bp) protein (103aa)
membrane protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037E57D2
Membrane protein {ECO:0000313|EMBL:KDN95065.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
BSR_inoc_29496_34
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36543..38498)
DNA (1956bp) protein (652aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Acetyl-coenzyme A synthetase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7A5_9GAMM
acetyl-CoA synthetase
BSR_inoc_29496_35
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38735..40246)
DNA (1512bp) protein (504aa)
Diguanylate cyclase n=2 Tax=Sulfurimonas gotlandica GD1 RepID=B6BH34_9HELI
Membrane protein containing GGDEF domain {ECO:0000313|EMBL:EHP29823.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
diguanylate cyclase
BSR_inoc_29496_36
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40243..43809)
DNA (3567bp) protein (1189aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
DNA polymerase III, alpha subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCQ9_THICA
BSR_inoc_29496_37
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43939..44733
DNA (795bp) protein (265aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7A7_9GAMM
leucyl-tRNA--protein transferase
BSR_inoc_29496_38
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44717..45106
DNA (390bp) protein (130aa)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ABB42621.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABB42621.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Succinate dehydrogenase subunit C n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E02_THICR
succinate dehydrogenase, cytochrome b subunit
BSR_inoc_29496_39
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45103..45447
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035C19E5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31648.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_40
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45437..47209
DNA (1773bp) protein (591aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Succinate dehydrogenase subunit A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E04_THICR
BSR_inoc_29496_41
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47228..47932
DNA (705bp) protein (235aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Thiomicrospira halophila RepID=UPI00037C2FA5
Succinate dehydrogenase {ECO:0000313|EMBL:KDN96215.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
BSR_inoc_29496_42
unknown

Not on your lists

47929..48198
DNA (270bp) protein (90aa)

This feature has no annotations

BSR_inoc_29496_43
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48253..48471
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7B3_9GAMM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_44
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48520..49026)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E0Y1_9GAMM
hypothetical protein
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
BSR_inoc_29496_45
unknown

Not on your lists

comp(49023..49241)
DNA (219bp) protein (73aa)
hypothetical protein
BSR_inoc_29496_46
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49246..50007)
DNA (762bp) protein (254aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7I3_9GAMM
BSR_inoc_29496_47
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50018..50224)
DNA (207bp) protein (69aa)
UPF0434 protein Thicy_1088 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8K4_THICA
hypothetical protein
UPF0434 protein Thicy_1088 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_48
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50221..51243)
DNA (1023bp) protein (341aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LPXK_THICR
BSR_inoc_29496_49
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51364..53157
DNA (1794bp) protein (598aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EA9_THICR
multi-sensor hybrid histidine kinase
BSR_inoc_29496_50
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53158..54237
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000362E8AC
response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABB42501.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_51
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54313..56658)
DNA (2346bp) protein (782aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8L1_THICA
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AEG31862.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_52
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56684..57250
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8L2_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31863.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_53
unknown

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comp(57256..57687)
DNA (432bp) protein (144aa)

This feature has no annotations

BSR_inoc_29496_54
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57672..59573)
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003825A68
Membrane protein {ECO:0000313|EMBL:KFJ93087.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
capD; polysaccharide biosynthesis protein CapD
BSR_inoc_29496_55
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59570..60757)
DNA (1188bp) protein (396aa)
aminotransferase n=1 Tax=Thiothrix flexilis RepID=UPI00035CCCA9
Aminotransferase {ECO:0000313|EMBL:KFX70344.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
aminotransferase
BSR_inoc_29496_56
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60751..61626)
DNA (876bp) protein (292aa)
Nucleoside-diphosphate-sugar epimerase, putative n=1 Tax=Francisella novicida FTG RepID=E2MQ69_FRANO
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:BAE48888.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
BSR_inoc_29496_57
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(61617..62657)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Francisella novicida FTG RepID=E2MQ68_FRANO
ATP-dependent carboxylate-amine ligase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
BSR_inoc_29496_58
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62660..63433)
DNA (774bp) protein (258aa)
putative metallophosphoesterase (EC:3.1.3.16)
Metallophosphoesterase n=1 Tax=Francisella novicida FTG RepID=E2MQ67_FRANO
Metallophosphoesterase {ECO:0000313|EMBL:AJR23021.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
BSR_inoc_29496_59
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63471..64091)
DNA (621bp) protein (207aa)
sugar transferase n=1 Tax=Thiothrix flexilis RepID=UPI00036EBA9B
sugar transferase
Sugar transferase {ECO:0000313|EMBL:AIJ45756.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
BSR_inoc_29496_60
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64075..65199)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D393DE
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AHY42549.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
Displaying items 31-60 of 309 in total

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