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BSR_inoc_64625

Search features with annotation key words

Displaying items 31-60 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_64625_31
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18754..18870
DNA (117bp) protein (39aa)
50S ribosomal protein L36 id=3250632 bin=GWF2_Bacteroidetes_43_63 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
rpmJ; 50S ribosomal protein L36
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_32
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18912..19292
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Bacteroides sp. CAG:545 RepID=R5S2Q1_9BACE
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
30S ribosomal protein S13
BSR_inoc_64625_33
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19335..19733
DNA (399bp) protein (133aa)
30S ribosomal protein S11 id=3867851 bin=GWF2_Bacteroidetes_43_11 species=Porphyromonas endodontalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S11
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_34
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19771..20376
DNA (606bp) protein (202aa)
30S ribosomal protein S4 id=3867852 bin=GWF2_Bacteroidetes_43_11 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S4
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_35
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20419..21414
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
DNA-directed RNA polymerase subunit alpha id=1789706 bin=GWE2_Bacteroidetes_42_24 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
BSR_inoc_64625_36
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists


21419..21907
DNA (489bp) protein (163aa)
50S ribosomal protein L17 id=2097839 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
50S ribosomal protein L17
Tax=BJP_IG2069_Bacteroidetes_43_11
BSR_inoc_64625_37
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21988..23283
DNA (1296bp) protein (432aa)
enolase (EC:4.2.1.11)
Enolase id=1789698 bin=GWE2_Bacteroidetes_42_24 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_38
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23634..23885)
DNA (252bp) protein (84aa)
30S ribosomal protein S20 id=2173931 bin=GWE2_Bacteroidetes_42_24 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
SSU ribosomal protein S20p
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_39
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24125..25555)
DNA (1431bp) protein (477aa)
hypothetical protein AtheD1_05135 id=1775354 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_40
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25574..26788)
DNA (1215bp) protein (405aa)
membrane protein involved in aromatic hydrocarbon degradation id=1775351 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
long-chain fatty acid transport protein, outer membrane protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_41

Not on your lists

comp(27412..27846)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BES3_PETMO
Marine sediment metagenome DNA, contig: S01H4_S16769 {ECO:0000313|EMBL:GAH17957.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BSR_inoc_64625_42
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27859..28899)
DNA (1041bp) protein (347aa)
Probable lipoprotein id=1828639 bin=GWE2_Bacteroidetes_42_24 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_43
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29217..29606
DNA (390bp) protein (130aa)
NADP-reducing hydrogenase subunit B id=1780231 bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
NADP oxidoreductase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_44
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29632..31425
DNA (1794bp) protein (598aa)
Uncharacterized protein id=4533603 bin=GWF2_Bacteroidetes_43_11 species=uncultured bacterium URE4 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
NADH dehydrogenase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_45
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31455..33224
DNA (1770bp) protein (590aa)
hydrogenase, Fe-only id=4533602 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
NADH:ubiquinone oxidoreductase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_46
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33259..33741
DNA (483bp) protein (161aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit id=4533601 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
NAD(P)-dependent iron-only hydrogenase diaphorase iron-sulfur protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_47
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

33887..37147
DNA (3261bp) protein (1087aa)
putative exported protease id=3615800 bin=GWF2_Bacteroidetes_43_11 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
peptidase S41
Tax=CG_Bacteroid_01
BSR_inoc_64625_48
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37333..38337)
DNA (1005bp) protein (335aa)
UPF0365 protein HMPREF9450_02134 id=4414759 bin=GWF2_Bacteroidetes_43_11 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_49
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38348..38812)
DNA (465bp) protein (155aa)
hypothetical protein AtheD1_13895 id=1892506 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
membrane-bound serine protease
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_50
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38817..39116)
DNA (300bp) protein (100aa)
ATP-dependent Clp protease ClpS {ECO:0000313|EMBL:KFD38615.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
Putative uncharacterized protein id=4414752 bin=GWF2_Bacteroidetes_43_11 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ATP-dependent Clp protease adaptor protein ClpS
BSR_inoc_64625_51
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39442..40083
DNA (642bp) protein (214aa)
NUDIX hydrolase id=3782202 bin=GWF2_Bacteroidetes_33_16 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
nudix hydrolase
Tax=GWE2_Bacteroidetes_32_14_curated
BSR_inoc_64625_52
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40513..41199
DNA (687bp) protein (229aa)
Futalosine nucleosidase id=2144009 bin=GWE2_Bacteroidetes_32_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
BSR_inoc_64625_53
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41248..42222
DNA (975bp) protein (325aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ADP-L-glycero-D-manno-heptose-6-epimerase id=4425341 bin=GWF2_Bacteroidetes_43_11 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ADP-L-glycero-D-manno-heptose-6-epimerase
BSR_inoc_64625_54
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42254..42667)
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=3720466 bin=GWA2_Bacteroidetes_A19_40_15 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
BSR_inoc_64625_55
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42676..43017)
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DFB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL82002.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
transcriptional regulator
BSR_inoc_64625_56
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43049..44038)
DNA (990bp) protein (330aa)
Peptidase M23 id=4217454 bin=GWF2_Bacteroidetes_43_11 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
metalloendopeptidase-like membrane protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_57
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


44254..46884
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase id=4217453 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
alanine--tRNA ligase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_64625_58
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46861..48900)
DNA (2040bp) protein (680aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS06863.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
ComEC/Rec2-related protein id=3804340 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ComEC/rec2-like protein
BSR_inoc_64625_59
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

49131..50135
DNA (1005bp) protein (335aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I id=2006758 bin=GWE2_Bacteroidetes_42_24 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=CG_Bacteroid_01
BSR_inoc_64625_60
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(50223..51089)
DNA (867bp) protein (289aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily id=1775203 bin=GWE2_Bacteroidetes_42_24 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 31-60 of 79 in total

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