ggKbase home page

BSR_inoc_164098_18

Organism: BSR_inoc_Bacteroidia_40_18

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 18313..18873

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCW3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 191.0
  • Bit_score: 135
  • Evalue 3.60e-29
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 191.0
  • Bit_score: 135
  • Evalue 5.00e-29
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 184.0
  • Bit_score: 129
  • Evalue 9.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGATAGAGGCTTTGCAAGAAAACAACCAAAATGCATTTCGTATCCTGGTCGAAAATTTTGAACCCATGATTAGGTCAATTGGATACCAACTCTTTATGCAAGAAGAAGAAGTGGAAGATTTTACCCAAGAGGTTTTTATGAAGATTCATCTCGGTATCTCAGGGTTTCGTAAAAAGTCTTCTCTATCCACATGGATATATCGCATAGCCCTGAATCATGGATTAAACTCGAAACGTAAAAATAGTGCTATTCCTTTTTCACATACTTCGCATAAAATTTATGCACAAGCCCTGGAATCAGAAAATAACATTCTTCATCCCAGAACTTTCAATCATTTTGTAGAAAAAAAGGAAACAAGAAAAATTTTAAACCATGCCTTGAATAAACTTCCAAAAAACCAGAGAATTGCATTTATTTTGACGCATATCGAGGATTTGTCCTACTCTGAAGTAGCCGAAATAATGGAAAAAACTCCAAAAGCCATCGATTCGCTTACACAACGAGCAAAAAACAACTTACGAAAATATCTTGCCAAGTATTATAAACTCCTAAAGCCATGA
PROTEIN sequence
Length: 187
LIEALQENNQNAFRILVENFEPMIRSIGYQLFMQEEEVEDFTQEVFMKIHLGISGFRKKSSLSTWIYRIALNHGLNSKRKNSAIPFSHTSHKIYAQALESENNILHPRTFNHFVEKKETRKILNHALNKLPKNQRIAFILTHIEDLSYSEVAEIMEKTPKAIDSLTQRAKNNLRKYLAKYYKLLKP*