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BSR_inoc_65344

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Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_65344_31
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(34561..35961)
DNA (1401bp) protein (467aa)
L-fucose isomerase, C-terminal domain protein id=2576523 bin=GWC2_Spirochaete_52_13 species=[Ruminococcus] obeum genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
L-fucose isomerase domain-containing protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_65344_32

Not on your lists

comp(36084..36422)
DNA (339bp) protein (113aa)
Carboxymuconolactone decarboxylase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JHZ6_DESDE
Marine sediment metagenome DNA, contig: S06H3_S26019 {ECO:0000313|EMBL:GAI55030.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Carboxymuconolactone decarboxylase
BSR_inoc_65344_33
Mesotoga infera, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(36490..37239)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JPG2_9THEM
Uncharacterized protein {ECO:0000313|EMBL:CCU84947.1}; TaxID=1236046 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;"
hypothetical protein
BSR_inoc_65344_34
Vagococcus lutrae, Vagococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37340..38338)
DNA (999bp) protein (333aa)
Ribose transport system permease rbsC n=1 Tax=Vagococcus lutrae LBD1 RepID=V6QCH4_9ENTE
Ribose transport system permease rbsC {ECO:0000313|EMBL:EST90278.1}; TaxID=1408226 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.;" source="Vagococcus lutrae LBD1.;"
rbsC; ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component
BSR_inoc_65344_35
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38343..39290)
DNA (948bp) protein (316aa)
sugar ABC transporter permease n=1 Tax=Cohnella laeviribosi RepID=UPI00037EDA38
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ENH96878.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
ribose transport system permease RbsC
BSR_inoc_65344_36
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(39268..40806)
DNA (1539bp) protein (513aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00037F9619
BSR_inoc_65344_37
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40879..41883)
DNA (1005bp) protein (335aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ARD8_THEM3
periplasmic binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADH60047.1}; Flags: Precursor;; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
BSR_inoc_65344_38
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(41898..42380)
DNA (483bp) protein (161aa)
Ureidoglycolate hydrolase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBY9_THENN
Ureidoglycolate hydrolase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_inoc_65344_39

Not on your lists

42554..43582
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035E8B3E
Marine sediment metagenome DNA, contig: S01H4_C00549 {ECO:0000313|EMBL:GAG73449.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LacI family transcriptional regulator
BSR_inoc_65344_40
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

43600..45123
DNA (1524bp) protein (508aa)
Xylulokinase id=4288083 bin=GWC2_Spirochaete_52_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
xylulose kinase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_65344_41
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(45148..45969)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036D274D
GntR family transcriptional regulator
Tax=Caldatribacterium saccharofermentans
BSR_inoc_65344_42
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(46052..47233)
DNA (1182bp) protein (394aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8)
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ADK82707.1}; EC=5.1.3.8 {ECO:0000313|EMBL:ADK82707.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
N-acylglucosamine 2-epimerase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7K2_SPISS
BSR_inoc_65344_43
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(47243..48394)
DNA (1152bp) protein (384aa)
Inner-membrane translocator n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7K3_SPISS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADK82708.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_44
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(48398..49924)
DNA (1527bp) protein (509aa)
xylose ABC transporter ATP-binding protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000372A014
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADK82709.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_45
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(49991..51052)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000360C66C
ABC-type ribose transporter, periplasmic component
ABC-type ribose transport system, periplasmic component {ECO:0000313|EMBL:ADK82710.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_46
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(51090..52043)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037FD76B
C_GCAxxG_C_C family protein
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:ADK82711.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_47
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(52050..52745)
DNA (696bp) protein (232aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
deoxyribose-phosphate aldolase n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003775B55
BSR_inoc_65344_48
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(52840..54024)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R6G9_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK80987.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_49
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(54008..55033)
DNA (1026bp) protein (342aa)
Regulatory protein GntR HTH n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7K8_SPISS
regulatory protein GntR
Regulatory protein GntR HTH {ECO:0000313|EMBL:ADK82713.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_50
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(55044..55700)
DNA (657bp) protein (219aa)
Transaldolase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7K9_SPISS
transaldolase
Transaldolase {ECO:0000313|EMBL:ADK82714.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_51
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(55716..56474)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7L0_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK82715.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_52
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

56587..57540
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035CA628
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADK82716.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_inoc_65344_53
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57529..58812)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=2085262 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides sp. 1_1_30 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Glycerol dehydrogenase-related enzyme
Tax=GWE2_Bacteroidetes_42_39_curated
BSR_inoc_65344_54
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

58893..60065
DNA (1173bp) protein (391aa)
Putative uncharacterized protein id=4411237 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_65344_55
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

60049..61506
DNA (1458bp) protein (486aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating id=4411238 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_65344_56
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(61487..61987)
DNA (501bp) protein (167aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:ADY14378.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ADY14378.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RT73_SPHGB
BSR_inoc_65344_57
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(61980..62867)
DNA (888bp) protein (296aa)
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase {ECO:0000313|EMBL:ADY14377.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADY14377.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Xanthine dehydrogenase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RT72_SPHGB
BSR_inoc_65344_58
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(62881..65166)
DNA (2286bp) protein (762aa)
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase {ECO:0000313|EMBL:ADY14376.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADY14376.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Xanthine dehydrogenase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RT71_SPHGB
BSR_inoc_65344_59
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65347..66747)
DNA (1401bp) protein (467aa)
UPI0003CE1C53 related cluster n=1 Tax=unknown RepID=UPI0003CE1C53
Uncharacterized protein {ECO:0000313|EMBL:ESY36501.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
BSR_inoc_65344_60
unknown

Not on your lists

comp(66713..67003)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 31-60 of 67 in total

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